AIMC Topic: PubMed

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Text mining for case report articles on "peritoneal dialysis" from PubMed database.

Therapeutic apheresis and dialysis : official peer-reviewed journal of the International Society for Apheresis, the Japanese Society for Apheresis, the Japanese Society for Dialysis Therapy Jun 1, 2025
INTRODUCTION: The number of published medical articles on peritoneal dialysis (PD) has been increasing, and efficiently selecting information from numerous articles can be difficult. In this study, we examined whether artificial intelligence (AI) tex...
Peritoneal Dialysis PubMed Data Mining Humans Artificial Intelligence
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Predicting drug-gene relations via analogy tasks with word embeddings.

Scientific reports May 18, 2025
Natural language processing is utilized in a wide range of fields, where words in text are typically transformed into feature vectors called embeddings. BioConceptVec is a specific example of embeddings tailored for biology, trained on approximately ...
Pharmaceutical Preparations PubMed Computational Biology Humans Natural Language Processing Algorithms
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Utility of word embeddings from large language models in medical diagnosis.

Journal of the American Medical Informatics Association : JAMIA Mar 1, 2025
OBJECTIVE: This study evaluates the utility of word embeddings, generated by large language models (LLMs), for medical diagnosis by comparing the semantic proximity of symptoms to their eponymic disease embedding ("eponymic condition") and the mean o...
Humans Semantics Symptom Assessment Natural Language Processing PubMed Tuberous Sclerosis Eponyms Large Language Models
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Representation of Social Determinants of Health terminology in medical subject headings: impact of added terms.

Journal of the American Medical Informatics Association : JAMIA Nov 1, 2024
OBJECTIVES: To enhance and evaluate the quality of PubMed search results for Social Determinants of Health (SDoH) through the addition of new SDoH terms to Medical Subject Headings (MeSH).
Social Determinants of Health Terminology as Topic Information Storage and Retrieval Medical Subject Headings PubMed Humans Algorithms Natural Language Processing
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Trends of "Artificial Intelligence, Machine Learning, Virtual Reality, and Radiomics in Urolithiasis" over the Last 30 Years (1994-2023) as Published in the Literature (PubMed): A Comprehensive Review.

Journal of endourology Aug 1, 2024
To analyze the bibliometric publication trend on the application of "Artificial Intelligence (AI) and its subsets (Machine Learning-ML, Virtual reality-VR, Radiomics) in Urolithiasis" over 3 decades. We looked at the publication trends associated wi...
Humans Artificial Intelligence Machine Learning Urolithiasis Bibliometrics Radiomics PubMed Virtual Reality
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Extracting Drug-Protein Relation from Literature Using Ensembles of Biomedical Transformers.

Studies in health technology and informatics Jan 25, 2024
Automatic extraction of relations between drugs/chemicals and proteins from ever-growing biomedical literature is required to build up-to-date knowledge bases in biomedicine. To promote the development of automated methods, BioCreative-VII organized ...
PubMed Knowledge Bases Electric Power Supplies
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Publication Type Tagging using Transformer Models and Multi-Label Classification.

AMIA ... Annual Symposium proceedings. AMIA Symposium Jan 1, 2024
Indexing articles by their publication type and study design is essential for efficient search and filtering of the biomedical literature, but is understudied compared to indexing by MeSH topical terms. In this study, we leveraged the human-curated p...
Humans Machine Learning Abstracting and Indexing Medical Subject Headings Natural Language Processing PubMed
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Clinfo.ai: An Open-Source Retrieval-Augmented Large Language Model System for Answering Medical Questions using Scientific Literature.

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing Jan 1, 2024
The quickly-expanding nature of published medical literature makes it challenging for clinicians and researchers to keep up with and summarize recent, relevant findings in a timely manner. While several closed-source summarization tools based on larg...
Humans Natural Language Processing Information Storage and Retrieval Language Computational Biology PubMed
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Classifiers of Medical Eponymy in Scientific Texts.

Studies in health technology and informatics May 18, 2023
Many concepts in the medical literature are named after persons. Frequent ambiguities and spelling varieties, however, complicate the automatic recognition of such eponyms with natural language processing (NLP) tools. Recently developed methods inclu...
PubMed Language Neural Networks, Computer Natural Language Processing Unified Medical Language System
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AIONER: all-in-one scheme-based biomedical named entity recognition using deep learning.

Bioinformatics (Oxford, England) May 4, 2023
MOTIVATION: Biomedical named entity recognition (BioNER) seeks to automatically recognize biomedical entities in natural language text, serving as a necessary foundation for downstream text mining tasks and applications such as information extraction...
Data Mining Deep Learning PubMed Software Language
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