Development Of the VAMPCT Score for Predicting Mortality in CKD Patients with COVID-19.

Journal: International journal of medical sciences
Published Date:

Abstract

Chronic kidney disease (CKD) patients with coronavirus disease 2019 (COVID-19) are at significant risk of death. However, clinical identification of high-risk individuals remains suboptimal despite the recognition of many pathophysiological and comorbidity-related risk factors. We aim to develop a clinically simple machine learning (ML)-based score to predict acute COVID-19 mortality among CKD patients. CKD inpatients with COVID-19 were prospectively enrolled from December 2022 to January 2023 with a three-month follow-up. Feature selection from clinical and laboratory results was performed through least absolute shrinkage and selection operator and stepwise selection. Logistic regression, support vector machine (SVM), random forest, and extreme gradient boosting were applied for ML model development. A predictive score for mortality was constructed using logistic regression. We compared predictive ability between the proposed score and other published scores. 219 CKD patients were included and had a high mortality rate of 25.1%. The SVM model exhibited the best performance, with the validation area under the receiver operating characteristic curve (AUC) being 0.946 (95% CI 0.918, 0.974). The COVID-19 vaccination status, age, monocyte percentage, prothrombin activity, cardiac troponin T, and total bilirubin ("VAMPCT") were the most relevant factors and utilized to develop the scoring system with an AUC of 0.960 (95% CI 0.935, 0.985). ML models predicting three-month mortality had favorable performance for CKD patients with COVID-19. The VAMPCT mortality score provided a user-friendly approach.

Authors

  • Chaofan Li
    School of Medical Information and Engineering, Xuzhou Medical University, Jiangsu 221004, China.
  • Yue Niu
    College of Engineering, Nanjing Agricultural University, Nanjing 210032, China.
  • Xinyan Pan
    Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
  • Dinghua Chen
    Department of Nephrology, First Medical Center of Chinese PLA General Hospital, State Key Laboratory of Kidney Diseases, National Clinical Research Center for Kidney Diseases, Beijing Key Laboratory of Medical Devices and Integrated Traditional Chinese and Western Drug Development for Severe Kidney Diseases, Beijing Key Laboratory of Digital Intelligent TCM for the Prevention and Treatment of Pan-vascular Diseases, Key Disciplines of National Administration of Traditional Chinese Medicine (zyyzdxk-2023310), Beijing 100853, China.
  • Fei Liu
    Department of Interventional Radiology, Qinghai Red Cross Hospital, Xining, Qinghai, China.
  • Zhe Feng
    Department of Cardiovascular Surgery, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, China.
  • Yong Wang
    State Key Laboratory of Chemical Biology and Drug Discovery, Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University Hunghom Kowloon Hong Kong P. R. China kwok-yin.wong@polyu.edu.hk.
  • Xueying Cao
    Department of Nephrology, First Medical Center of Chinese PLA General Hospital, State Key Laboratory of Kidney Diseases, National Clinical Research Center for Kidney Diseases, Beijing Key Laboratory of Medical Devices and Integrated Traditional Chinese and Western Drug Development for Severe Kidney Diseases, Beijing Key Laboratory of Digital Intelligent TCM for the Prevention and Treatment of Pan-vascular Diseases, Key Disciplines of National Administration of Traditional Chinese Medicine (zyyzdxk-2023310), Beijing 100853, China.
  • Jie Wu
    Center of Disease Control of Qingdao, 175 Shandong Road, Qingdao, Shandong, 266001, China.
  • Jiabao Liu
    Department of Thoracic Surgery, First Hospital of Shijiazhuang, Shijiazhuang, China.
  • Xin Guan
    Guangzhou Xinhua University, Dongguan, China.
  • Xuefeng Sun
    Department of Nephrology, Chinese PLA General Hospital, Chinese PLA Institute of Nephrology, State Key Laboratory of Kidney Diseases, National Clinical Research Center for Kidney Diseases, Beijing Key Laboratory of Kidney Disease Research, Beijing, China.
  • Li Zhang
    Department of Animal Nutrition and Feed Science, College of Animal Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
  • Guangyan Cai
    Department of Nephrology, Chinese PLA General Hospital, Chinese PLA Institute of Nephrology, State Key Laboratory of Kidney Diseases, National Clinical Research Center for Kidney Diseases, Beijing, CHINA.
  • Xiangmei Chen
    Department of Nephrology, Chinese PLA General Hospital, Chinese PLA Institute of Nephrology, State Key Laboratory of Kidney Diseases, National Clinical Research Center for Kidney Diseases, Beijing Key Laboratory of Kidney Disease Research, Beijing, China.
  • Ping Li
    Department of Gastroenterology, Beijing Ditan Hospital, Capital Medical University, Beijing, China.