AIMC Topic: Clustered Regularly Interspaced Short Palindromic Repeats

Clear Filters Showing 11 to 15 of 15 articles

Deep Learning-Based Classification of CRISPR Loci Using Repeat Sequences.

ACS synthetic biology May 16, 2025
With the widespread application of the CRISPR-Cas system in gene editing and related fields, along with the increasing availability of metagenomic data, the demand for detecting and classifying CRISPR-Cas systems in metagenomic data sets has grown si...
Neural Networks, Computer Deep Learning CRISPR-Cas Systems Clustered Regularly Interspaced Short Palindromic Repeats Gene Editing Repetitive Sequences, Nucleic Acid
View on PubMed DOI

The Evolution of Nucleic Acid-Based Diagnosis Methods from the (pre-)CRISPR to CRISPR era and the Associated Machine/Deep Learning Approaches in Relevant RNA Design.

Methods in molecular biology (Clifton, N.J.) Jan 1, 2025
Nucleic acid tests (NATs) are considered as gold standard in molecular diagnosis. To meet the demand for onsite, point-of-care, specific and sensitive, trace and genotype detection of pathogens and pathogenic variants, various types of NATs have been...
Humans Machine Learning Deep Learning Molecular Diagnostic Techniques Nucleic Acid Amplification Techniques CRISPR-Cas Systems RNA Clustered Regularly Interspaced Short Palindromic Repeats
View on PubMed DOI

CROTON: an automated and variant-aware deep learning framework for predicting CRISPR/Cas9 editing outcomes.

Bioinformatics (Oxford, England) Jul 12, 2021
MOTIVATION: CRISPR/Cas9 is a revolutionary gene-editing technology that has been widely utilized in biology, biotechnology and medicine. CRISPR/Cas9 editing outcomes depend on local DNA sequences at the target site and are thus predictable. However, ...
Neural Networks, Computer Deep Learning CRISPR-Cas Systems Clustered Regularly Interspaced Short Palindromic Repeats Gene Editing RNA, Guide, CRISPR-Cas Systems
View on PubMed DOI

CRISPRidentify: identification of CRISPR arrays using machine learning approach.

Nucleic acids research Feb 26, 2021
CRISPR-Cas are adaptive immune systems that degrade foreign genetic elements in archaea and bacteria. In carrying out their immune functions, CRISPR-Cas systems heavily rely on RNA components. These CRISPR (cr) RNAs are repeat-spacer units that are p...
Machine Learning Software Clustered Regularly Interspaced Short Palindromic Repeats Genome, Bacterial Genome, Archaeal
View on PubMed DOI

Machine learning finds Cas9-edited genotypes.

Nature biomedical engineering Dec 1, 2018
Machine Learning Genotype CRISPR-Cas Systems Clustered Regularly Interspaced Short Palindromic Repeats Gene Editing
View on PubMed DOI
Popular Topics
Recent Journals