AIMC Topic: Computers, Molecular

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Discovery of small molecule binders of human FSHR(TMD) with novel structural scaffolds by integrating structural bioinformatics and machine learning algorithms.

Journal of molecular graphics & modelling Mar 5, 2019
BACKGROUND: The activation of follicle stimulating hormone receptor (FSHR) by FSH and the consequent downstream signaling activities are crucial for reproductive health. The role of FSHR in tumor progression as well as osteoporosis advancement has al...
Binding Sites Computers, Molecular Quantitative Structure-Activity Relationship Receptors, FSH Cell Line Models, Molecular Ligands Hydrophobic and Hydrophilic Interactions Protein Binding Computational Biology Machine Learning Drug Design Humans
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On String Languages Generated by Spiking Neural P Systems With Structural Plasticity.

IEEE transactions on nanobioscience Nov 2, 2018
Spiking neural P systems (SNP systems) are parallel and non-deterministic models of computation, inspired by the neural system of the brain. A variant of SNP systems known as SNP systems with structural plasticity (SNPSP systems) includes the feature...
Programming Languages Synapses Computers, Molecular Models, Neurological Action Potentials Neural Networks, Computer Neuronal Plasticity
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P Systems-Based Computing Polynomials With Integer Coefficients: Design and Formal Verification.

IEEE transactions on nanobioscience May 16, 2018
Automatic design of mechanical procedures solving abstract problems is a relevant scientific challenge. In particular, automatic design of membranes systems performing some prefixed tasks is an important and useful research topic in the area of Natur...
Neural Networks, Computer Computational Biology Algorithms Computers, Molecular Computer Simulation
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DNA Implementation of Fuzzy Inference Engine: Towards DNA Decision-Making Systems.

IEEE transactions on nanobioscience Oct 9, 2017
Decision-making systems are an integral part of any autonomous device. With the recent developments in bio-nanorobots, smart drugs, and engineered viruses, there is an immediate need of decision-making systems which are bio-compatible in nature. DNA ...
Computers, Molecular Robotics DNA Computer Simulation Nanotechnology Fuzzy Logic Decision Making, Computer-Assisted
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On the Universality and Non-Universality of Spiking Neural P Systems With Rules on Synapses.

IEEE transactions on nanobioscience Nov 25, 2015
Spiking neural P systems with rules on synapses are a new variant of spiking neural P systems. In the systems, the neuron contains only spikes, while the spiking/forgetting rules are moved on the synapses. It was obtained that such system with 30 neu...
Synapses Humans Computers, Molecular Models, Neurological Neural Networks, Computer Action Potentials
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Construction of a fuzzy and Boolean logic gates based on DNA.

Small (Weinheim an der Bergstrasse, Germany) Jan 7, 2015
Logic gates are devices that can perform logical operations by transforming a set of inputs into a predictable single detectable output. The hybridization properties, structure, and function of nucleic acids can be used to make DNA-based logic gates....
Equipment Failure Analysis Computers, Molecular Equipment Design Signal Processing, Computer-Assisted Fuzzy Logic DNA
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Multiple-input and multiple-output encoders with DNA-based winner-take-all neural Networks.

Neural networks : the official journal of the International Neural Network Society Sep 1, 2025
DNA logic circuits are essential building blocks for molecular computers. Traditional molecular logic circuits primarily use basic gate circuits as computational units, achieving complex functions via multiple cascades. However, even simple logical f...
DNA Neural Networks, Computer Computers, Molecular Computer Simulation
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A Novel Linear Machine Learning Method Based on DNA Hybridization Reaction Circuit.

IEEE transactions on nanobioscience Jul 1, 2025
DNA hybridization reaction is a significant technology in the field of semi-synthetic biology and holds great potential for use in biological computation. In this study, we propose a novel machine learning model based on a DNA hybridization reaction ...
Machine Learning Algorithms Nucleic Acid Hybridization DNA Computers, Molecular Synthetic Biology
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Nonlinear manipulation and analysis of large DNA datasets.

Nucleic acids research Aug 26, 2022
Information processing functions are essential for organisms to perceive and react to their complex environment, and for humans to analyze and rationalize them. While our brain is extraordinary at processing complex information, winner-take-all, as a...
Neurons Humans Computers, Molecular Brain Neural Networks, Computer DNA
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Construction of Molecular Robots from Microtubules for Programmable Swarming.

Methods in molecular biology (Clifton, N.J.) Jan 1, 2022
Swarm robotics has been attracting much attention in recent years in the field of robotics. This chapter describes a methodology for the construction of molecular swarm robots through precise control of active self-assembly of microtubules (MTs). Det...
Microtubules Computers, Molecular Robotics DNA
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