AIMC Topic: Image Processing, Computer-Assisted

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A Large-Scale Fully Annotated Low-Cost Microscopy Image Dataset for Deep Learning Framework.

IEEE transactions on nanobioscience
This work presents a large-scale three-fold annotated, low-cost microscopy image dataset of potato tubers for plant cell analysis in deep learning (DL) framework which has huge potential in the advancement of plant cell biology research. Indeed, low-...

IFSS-Net: Interactive Few-Shot Siamese Network for Faster Muscle Segmentation and Propagation in Volumetric Ultrasound.

IEEE transactions on medical imaging
We present an accurate, fast and efficient method for segmentation and muscle mask propagation in 3D freehand ultrasound data, towards accurate volume quantification. A deep Siamese 3D Encoder-Decoder network that captures the evolution of the muscle...

Active Cell Appearance Model Induced Generative Adversarial Networks for Annotation-Efficient Cell Segmentation and Identification on Adaptive Optics Retinal Images.

IEEE transactions on medical imaging
Data annotation is a fundamental precursor for establishing large training sets to effectively apply deep learning methods to medical image analysis. For cell segmentation, obtaining high quality annotations is an expensive process that usually requi...

Few-Shot Learning by a Cascaded Framework With Shape-Constrained Pseudo Label Assessment for Whole Heart Segmentation.

IEEE transactions on medical imaging
Automatic and accurate 3D cardiac image segmentation plays a crucial role in cardiac disease diagnosis and treatment. Even though CNN based techniques have achieved great success in medical image segmentation, the expensive annotation, large memory c...

Generating Synthetic Labeled Data From Existing Anatomical Models: An Example With Echocardiography Segmentation.

IEEE transactions on medical imaging
Deep learning can bring time savings and increased reproducibility to medical image analysis. However, acquiring training data is challenging due to the time-intensive nature of labeling and high inter-observer variability in annotations. Rather than...

Weakly Supervised Cell Segmentation by Point Annotation.

IEEE transactions on medical imaging
We propose weakly supervised training schemes to train end-to-end cell segmentation networks that only require a single point annotation per cell as the training label and generate a high-quality segmentation mask close to those fully supervised meth...

A Unified Framework for Generalized Low-Shot Medical Image Segmentation With Scarce Data.

IEEE transactions on medical imaging
Medical image segmentation has achieved remarkable advancements using deep neural networks (DNNs). However, DNNs often need big amounts of data and annotations for training, both of which can be difficult and costly to obtain. In this work, we propos...

Contour Transformer Network for One-Shot Segmentation of Anatomical Structures.

IEEE transactions on medical imaging
Accurate segmentation of anatomical structures is vital for medical image analysis. The state-of-the-art accuracy is typically achieved by supervised learning methods, where gathering the requisite expert-labeled image annotations in a scalable manne...

Bidirectional Mapping-Based Domain Adaptation for Nucleus Detection in Cross-Modality Microscopy Images.

IEEE transactions on medical imaging
Cell or nucleus detection is a fundamental task in microscopy image analysis and has recently achieved state-of-the-art performance by using deep neural networks. However, training supervised deep models such as convolutional neural networks (CNNs) u...

New segmentation and feature extraction algorithm for classification of white blood cells in peripheral smear images.

Scientific reports
This article addresses a new method for the classification of white blood cells (WBCs) using image processing techniques and machine learning methods. The proposed method consists of three steps: detecting the nucleus and cytoplasm, extracting featur...