AIMC Topic: Knowledge

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Graph representation learning in bioinformatics: trends, methods and applications.

Briefings in bioinformatics
Graph is a natural data structure for describing complex systems, which contains a set of objects and relationships. Ubiquitous real-life biomedical problems can be modeled as graph analytics tasks. Machine learning, especially deep learning, succeed...

Protein matchmaking through representation learning.

Cell systems
Sledzieski, Singh, Cowen, and Berger employ representation learning to predict protein interactions and associations, additionally identifying binding residues between protein pairs. Generalizability is showcased by training on one organism while eva...

The epistemological wheel turns: AI's tipping point is here.

FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Converting disease maps into heavyweight ontologies: general methodology and application to Alzheimer's disease.

Database : the journal of biological databases and curation
Omics technologies offer great promises for improving our understanding of diseases. The integration and interpretation of such data pose major challenges, calling for adequate knowledge models. Disease maps provide curated knowledge about disorders'...

COVID-19 and the epistemology of epidemiological models at the dawn of AI.

Annals of human biology
The models used to estimate disease transmission, susceptibility and severity determine what epidemiology can (and cannot tell) us about COVID-19. These include: 'model organisms' chosen for their phylogenetic/aetiological similarities; multivariable...

Searching for Models for Psychological Science: A Possible Contribution of Simulation.

Integrative psychological & behavioral science
The problem of the theoretical precariousness of psychology requires defining, at an epistemological level, its concepts and languages and the use of models for finding core concepts and building more or less 'hard' theories. After reviewing some mai...

An Approach of Integrating Domain Knowledge into Data-Driven Diagnostic Model.

Studies in health technology and informatics
A diagnostic model of general diseases could help general practitioners to decrease misdiagnoses and reduce workload. In this paper, we developed a neural network model that can classify potential diagnoses among 100 selected common diseases based on...

Evaluating the Validity of a Knowledge-Based System for Proactive Knowledge Transfer for Caregiving Relatives.

Studies in health technology and informatics
The evaluation of the validity of a knowledge-based system is of great importance during its development. It determines whether the system represents the experts' knowledge correctly. This is highly important, but also particularly difficult, if the ...