AIMC Topic: Natural Language Processing

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Localizing in-domain adaptation of transformer-based biomedical language models.

Journal of biomedical informatics
In the era of digital healthcare, the huge volumes of textual information generated every day in hospitals constitute an essential but underused asset that could be exploited with task-specific, fine-tuned biomedical language representation models, i...

Advances in monolingual and crosslingual automatic disability annotation in Spanish.

BMC bioinformatics
BACKGROUND: Unlike diseases, automatic recognition of disabilities has not received the same attention in the area of medical NLP. Progress in this direction is hampered by obstacles like the lack of annotated corpus. Neural architectures learn to tr...

Overview of the 2022 n2c2 shared task on contextualized medication event extraction in clinical notes.

Journal of biomedical informatics
BACKGROUND: An accurate medication history, foundational for providing quality medical care, requires understanding of medication change events documented in clinical notes. However, extracting medication changes without the necessary clinical contex...

Extraction of use case diagram elements using natural language processing and network science.

PloS one
Software engineering artifact extraction from natural language requirements without human intervention is a challenging task. Out of these artifacts, the use case plays a prominent role in software design and development. In the literature, most of t...

Developing an Automated Registry (Autoregistry) of Spine Surgery Using Natural Language Processing and Health System Scale Databases.

Neurosurgery
BACKGROUND AND OBJECTIVES: Clinical registries are critical for modern surgery and underpin outcomes research, device monitoring, and trial development. However, existing approaches to registry construction are labor-intensive, costly, and prone to m...

Supervised Text Classification System Detects Fontan Patients in Electronic Records With Higher Accuracy Than Codes.

Journal of the American Heart Association
Background The Fontan operation is associated with significant morbidity and premature mortality. Fontan cases cannot always be identified by () codes, making it challenging to create large Fontan patient cohorts. We sought to develop natural langua...

Leveraging Natural Language Processing to Improve Electronic Health Record Suicide Risk Prediction for Veterans Health Administration Users.

The Journal of clinical psychiatry
Suicide risk prediction models frequently rely on structured electronic health record (EHR) data, including patient demographics and health care usage variables. Unstructured EHR data, such as clinical notes, may improve predictive accuracy by allow...

Automatic Extraction of Comprehensive Drug Safety Information from Adverse Drug Event Narratives in the Korea Adverse Event Reporting System Using Natural Language Processing Techniques.

Drug safety
INTRODUCTION: Concerns have been raised over the quality of drug safety information, particularly data completeness, collected through spontaneous reporting systems (SRS), although regulatory agencies routinely use SRS data to guide their pharmacovig...

Let's be fair. What about an AI editor?

Accountability in research
Much of the current attention on artificial intelligence (AI)-based natural language processing (NLP) systems has focused on research ethics and integrity but neglects their roles in the editorial and peer-reviewing process. We argue that the academi...