Microfluidics-based label-free SERS profiling of exosomes with machine learning for osteosarcoma diagnosis.

Journal: Talanta
Published Date:

Abstract

Osteosarcoma (OS) calls for early diagnosis to significantly improve patient survival rates. Exosomes hold significant potential as noninvasive biomarkers for the early diagnosis of cancer. Here, we design a microfluidic device to purify and analyze plasma-derived exosomes by label-free surface-enhanced Raman spectroscopy (SERS) profiling for OS diagnosis. Exosomes were isolated, purified, and enriched using a size-dependent microfluidic chip with tangential flow filtration, achieving a high recovery rate of 82 %. The isolated exosomes were then analyzed by label-free SERS using a nanoarray chip with self-assembly monolayers of gold nanoparticles (GNPs). Exosomes originating from different OS cell types were differentiated based on the intrinsic SERS signals. Our approach was further employed to analyze the plasma-derived exosomes from healthy donors and OS patients without the need for specific biomarker labeling. A machine learning-based diagnostic model for OS was constructed, achieving an accuracy of 93 %. The findings indicate that our method is valuable for noninvasive and precise diagnosis of OS and could be generalized to other diseases in the future.

Authors

  • Ying Jin
    Department of Immunology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230032, PR China.
  • Junjie Zhang
    Department of Immunology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230032, PR China.
  • Xinyi Wu
    Department of Immunology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230032, PR China.
  • Cheng Qu
    China Light Industry Key Laboratory of Meat Microbial Control and Utilization, School of Food and Biological Engineering, Engineering Research Center of Bio-process, Ministry of Education, Hefei University of Technology, Hefei, 230009, PR China.
  • Xingru Fang
    China Light Industry Key Laboratory of Meat Microbial Control and Utilization, School of Food and Biological Engineering, Engineering Research Center of Bio-process, Ministry of Education, Hefei University of Technology, Hefei, 230009, PR China.
  • Yi Yang
    Department of Orthopedics, Orthopedic Research Institute, West China Hospital, Sichuan University, Chengdu, Sichuan, China.
  • Yue Yuan
    Department of Sanitary Technology, West China School of Public Health, University of Sichuan, Chengdu 610041, China.
  • Honglin Liu
    China Light Industry Key Laboratory of Meat Microbial Control and Utilization, School of Food and Biological Engineering, Engineering Research Center of Bio-process, Ministry of Education, Hefei University of Technology, Hefei, 230009, PR China. Electronic address: liuhonglin@mail.ustc.edu.cn.
  • Zhenzhen Han
    Department of Immunology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230032, PR China. Electronic address: hanzhenzhen@ahmu.edu.cn.