AIMC Topic: Algorithms

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Predictive Coding Approximates Backprop Along Arbitrary Computation Graphs.

Neural computation
Backpropagation of error (backprop) is a powerful algorithm for training machine learning architectures through end-to-end differentiation. Recently it has been shown that backprop in multilayer perceptrons (MLPs) can be approximated using predictive...

Hypothesis Test and Confidence Analysis With Wasserstein Distance on General Dimension.

Neural computation
We develop a general framework for statistical inference with the 1-Wasserstein distance. Recently, the Wasserstein distance has attracted considerable attention and has been widely applied to various machine learning tasks because of its excellent p...

Advancements in Algorithms and Neuromorphic Hardware for Spiking Neural Networks.

Neural computation
Artificial neural networks (ANNs) have experienced a rapid advancement for their success in various application domains, including autonomous driving and drone vision. Researchers have been improving the performance efficiency and computational requi...

SAINTENS: Self-Attention and Intersample Attention Transformer for Digital Biomarker Development Using Tabular Healthcare Real World Data.

Studies in health technology and informatics
BACKGROUND: Deep learning currently struggles with tabular data, but it can benefit from multimodal learning. SAINT is a deep learning model for tabular data on which we base our presented developments.

Evaluation of Domain-Specific Word Vectors for Biomedical Word Sense Disambiguation.

Studies in health technology and informatics
Among medical applications of natural language processing (NLP), word sense disambiguation (WSD) estimates alternative meanings from text around homonyms. Recently developed NLP methods include word vectors that combine easy computability with nuance...

Context-aware learning for cancer cell nucleus recognition in pathology images.

Bioinformatics (Oxford, England)
MOTIVATION: Nucleus identification supports many quantitative analysis studies that rely on nuclei positions or categories. Contextual information in pathology images refers to information near the to-be-recognized cell, which can be very helpful for...

Interpretable-ADMET: a web service for ADMET prediction and optimization based on deep neural representation.

Bioinformatics (Oxford, England)
MOTIVATION: In the process of discovery and optimization of lead compounds, it is difficult for non-expert pharmacologists to intuitively determine the contribution of substructure to a particular property of a molecule.

Integrating specific and common topologies of heterogeneous graphs and pairwise attributes for drug-related side effect prediction.

Briefings in bioinformatics
MOTIVATION: Computerized methods for drug-related side effect identification can help reduce costs and speed up drug development. Multisource data about drug and side effects are widely used to predict potential drug-related side effects. Heterogeneo...

Attention-based Knowledge Graph Representation Learning for Predicting Drug-drug Interactions.

Briefings in bioinformatics
Drug-drug interactions (DDIs) are known as the main cause of life-threatening adverse events, and their identification is a key task in drug development. Existing computational algorithms mainly solve this problem by using advanced representation lea...

Structured Sparse Regularized TSK Fuzzy System for predicting therapeutic peptides.

Briefings in bioinformatics
Therapeutic peptides act on the skeletal system, digestive system and blood system, have antibacterial properties and help relieve inflammation. In order to reduce the resource consumption of wet experiments for the identification of therapeutic pept...