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Crystallization

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The Virtual Screening of the Drug Protein with a Few Crystal Structures Based on the Adaboost-SVM.

Computational and mathematical methods in medicine
Using the theory of machine learning to assist the virtual screening (VS) has been an effective plan. However, the quality of the training set may reduce because of mixing with the wrong docking poses and it will affect the screening efficiencies. To...

Super-Thresholding: Supervised Thresholding of Protein Crystal Images.

IEEE/ACM transactions on computational biology and bioinformatics
In general, a single thresholding technique is developed or enhanced to separate foreground objects from background for a domain of images. This idea may not generate satisfactory results for all images in a dataset, since different images may requir...

Beyond Rotatable Bond Counts: Capturing 3D Conformational Flexibility in a Single Descriptor.

Journal of chemical information and modeling
A new molecular descriptor, nConf, based on chemical connectivity, is presented which captures the accessible conformational space of a molecule. Currently the best available two-dimensional descriptors for quantifying the flexibility of a particular...