AIMC Topic: Fossils

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DeepDive: estimating global biodiversity patterns through time using deep learning.

Nature communications
Understanding how biodiversity has changed through time is a central goal of evolutionary biology. However, estimates of past biodiversity are challenged by the inherent incompleteness of the fossil record, even when state-of-the-art statistical meth...

Asymmetric fin shape changes swimming dynamics of ancient marine reptiles' soft robophysical models.

Bioinspiration & biomimetics
Animals have evolved highly effective locomotion capabilities in terrestrial, aerial, and aquatic environments. Over life's history, mass extinctions have wiped out unique animal species with specialized adaptations, leaving paleontologists to recons...

Pollen identification through convolutional neural networks: First application on a full fossil pollen sequence.

PloS one
The automation of pollen identification has seen vast improvements in the past years, with Convolutional Neural Networks coming out as the preferred tool to train models. Still, only a small portion of works published on the matter address the identi...

Artificial neural networks reconstruct missing perikymata in worn teeth.

Anatomical record (Hoboken, N.J. : 2007)
Dental evolutionary studies in hominins are key to understanding how our ancestors and close fossil relatives grew from the early stages of embryogenesis into adults. In a sense, teeth are like an airplane's 'black box' as they record important varia...

Automatic identification and morphological comparison of bivalve and brachiopod fossils based on deep learning.

PeerJ
Fossil identification is an essential and fundamental task for conducting palaeontological research. Because the manual identification of fossils requires extensive experience and is time-consuming, automatic identification methods are proposed. Howe...

African bovid tribe classification using transfer learning and computer vision.

Annals of the New York Academy of Sciences
Objective analytical identification methods are still a minority in the praxis of paleobiological sciences. Subjective interpretation of fossils and their modifications remains a nonreplicable expert endeavor. Identification of African bovids is a cr...

The origin and evolution of open habitats in North America inferred by Bayesian deep learning models.

Nature communications
Some of the most extensive terrestrial biomes today consist of open vegetation, including temperate grasslands and tropical savannas. These biomes originated relatively recently in Earth's history, likely replacing forested habitats in the second hal...

Revisiting the out of Africa event with a deep-learning approach.

American journal of human genetics
Anatomically modern humans evolved around 300 thousand years ago in Africa. They started to appear in the fossil record outside of Africa as early as 100 thousand years ago, although other hominins existed throughout Eurasia much earlier. Recently, s...

Impacts of speciation and extinction measured by an evolutionary decay clock.

Nature
The hypothesis that destructive mass extinctions enable creative evolutionary radiations (creative destruction) is central to classic concepts of macroevolution. However, the relative impacts of extinction and radiation on the co-occurrence of specie...

Deep learning in deep time.

Proceedings of the National Academy of Sciences of the United States of America