AIMC Topic: Image Processing, Computer-Assisted

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Evaluation of mediastinal lymph node segmentation of heterogeneous CT data with full and weak supervision.

Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
Accurate lymph node size estimation is critical for staging cancer patients, initial therapeutic management, and assessing response to therapy. Current standard practice for quantifying lymph node size is based on a variety of criteria that use uni-d...

Cellstitch: 3D cellular anisotropic image segmentation via optimal transport.

BMC bioinformatics
BACKGROUND: Spatial mapping of transcriptional states provides valuable biological insights into cellular functions and interactions in the context of the tissue. Accurate 3D cell segmentation is a critical step in the analysis of this data towards u...

A deep learning approach to the automatic detection of alignment errors in cryo-electron tomographic reconstructions.

Journal of structural biology
Electron tomography is an imaging technique that allows for the elucidation of three-dimensional structural information of biological specimens in a very general context, including cellular in situ observations. The approach starts by collecting a se...

Ultrafast Cardiac Imaging Using Deep Learning for Speckle-Tracking Echocardiography.

IEEE transactions on ultrasonics, ferroelectrics, and frequency control
High-quality ultrafast ultrasound imaging is based on coherent compounding from multiple transmissions of plane waves (PW) or diverging waves (DW). However, compounding results in reduced frame rate, as well as destructive interferences from high-vel...

Deep learning-based automated detection of the dental crown finish line: An accuracy study.

The Journal of prosthetic dentistry
STATEMENT OF PROBLEM: The marginal fit of dental prostheses is a clinically significant issue, and dental computer-aided design software programs use automated methods to expedite the extraction of finish lines. The accuracy of these automated method...

Deep learning based uncertainty prediction of deformable image registration for contour propagation and dose accumulation in online adaptive radiotherapy.

Physics in medicine and biology
Online adaptive radiotherapy aims to fully leverage the advantages of highly conformal therapy by reducing anatomical and set-up uncertainty, thereby alleviating the need for robust treatments. This requires extensive automation, among which is the u...

Machine learning identification of Pseudomonas aeruginosa strains from colony image data.

PLoS computational biology
When grown on agar surfaces, microbes can produce distinct multicellular spatial structures called colonies, which contain characteristic sizes, shapes, edges, textures, and degrees of opacity and color. For over one hundred years, researchers have u...

Deep learning-based automated kidney and cyst segmentation of autosomal dominant polycystic kidney disease using single vs. multi-institutional data.

Clinical imaging
PURPOSE: This study aimed to investigate if a deep learning model trained with a single institution's data has comparable accuracy to that trained with multi-institutional data for segmenting kidney and cyst regions in magnetic resonance (MR) images ...

Three-dimensional spine reconstruction from biplane radiographs using convolutional neural networks.

Medical engineering & physics
PURPOSE: The purpose of this study was to develop and evaluate a deep learning network for three-dimensional reconstruction of the spine from biplanar radiographs.