AI Medical Compendium Topic:
Software

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MISpheroID: a knowledgebase and transparency tool for minimum information in spheroid identity.

Nature methods
Spheroids are three-dimensional cellular models with widespread basic and translational application across academia and industry. However, methodological transparency and guidelines for spheroid research have not yet been established. The MISpheroID ...

The promise of automated machine learning for the genetic analysis of complex traits.

Human genetics
The genetic analysis of complex traits has been dominated by parametric statistical methods due to their theoretical properties, ease of use, computational efficiency, and intuitive interpretation. However, there are likely to be patterns arising fro...

Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram.

Nature methods
Charting an organs' biological atlas requires us to spatially resolve the entire single-cell transcriptome, and to relate such cellular features to the anatomical scale. Single-cell and single-nucleus RNA-seq (sc/snRNA-seq) can profile cells comprehe...

A Manycore Vision Processor for Real-Time Smart Cameras.

Sensors (Basel, Switzerland)
Real-time image processing and computer vision systems are now in the mainstream of technologies enabling applications for cyber-physical systems, Internet of Things, augmented reality, and Industry 4.0. These applications bring the need for Smart Ca...

An Open Medical Platform to Share Source Code and Various Pre-Trained Weights for Models to Use in Deep Learning Research.

Korean journal of radiology
Deep learning-based applications have great potential to enhance the quality of medical services. The power of deep learning depends on open databases and innovation. Radiologists can act as important mediators between deep learning and medicine by s...

Hourly Origin-Destination Matrix Estimation Using Intelligent Transportation Systems Data and Deep Learning.

Sensors (Basel, Switzerland)
Predicting the travel demand plays an indispensable role in urban transportation planning. Data collection methods for estimating the origin-destination (OD) demand matrix are being extensively shifted from traditional survey techniques to the pre-co...

Accurate prediction of protein torsion angles using evolutionary signatures and recurrent neural network.

Scientific reports
The amino acid sequence of a protein contains all the necessary information to specify its shape, which dictates its biological activities. However, it is challenging and expensive to experimentally determine the three-dimensional structure of protei...

DeepImageTranslator: A free, user-friendly graphical interface for image translation using deep-learning and its applications in 3D CT image analysis.

SLAS technology
The advent of deep-learning has set new standards in an array of image translation applications. At present, the use of these methods often requires computer programming experience. Non-commercial programs with graphical interface usually do not allo...

A new framework based on features modeling and ensemble learning to predict query performance.

PloS one
A query optimizer attempts to predict a performance metric based on the amount of time elapsed. Theoretically, this would necessitate the creation of a significant overhead on the core engine to provide the necessary query optimizing statistics. Mach...

Deep learning evaluation of biomarkers from echocardiogram videos.

EBioMedicine
BACKGROUND: Laboratory testing is routinely used to assay blood biomarkers to provide information on physiologic state beyond what clinicians can evaluate from interpreting medical imaging. We hypothesized that deep learning interpretation of echocar...