This study aims to solve the overfitting problem caused by insufficient labeled images in the automatic image annotation field. We propose a transfer learning model called CNN-2L that incorporates the label localization strategy described in this stu...
A principal challenge in the analysis of tissue imaging data is cell segmentation-the task of identifying the precise boundary of every cell in an image. To address this problem we constructed TissueNet, a dataset for training segmentation models tha...
Models for keyword spotting in continuous recordings can significantly improve the experience of navigating vast libraries of audio recordings. In this paper, we describe the development of such a keyword spotting system detecting regions of interest...
Deep learning is emerging as a powerful approach for bioimage analysis. Its use in cell tracking is limited by the scarcity of annotated data for the training of deep-learning models. Moreover, annotation, training, prediction, and proofreading curre...
The Reactome Knowledgebase (https://reactome.org), an Elixir core resource, provides manually curated molecular details across a broad range of physiological and pathological biological processes in humans, including both hereditary and acquired dise...
Recent advances in computer vision are primarily driven by the usage of deep learning, which is known to require large amounts of data, and creating datasets for this purpose is not a trivial task. Larger benchmark datasets often have detailed proces...
Biomedical research data reuse and sharing is essential for fostering research progress. To this aim, data producers need to master data management and reporting through standard and rich metadata, as encouraged by open data initiatives such as the F...
Imperfections in data annotation, known as label noise, are detrimental to the training of machine learning models and have a confounding effect on the assessment of model performance. Nevertheless, employing experts to remove label noise by fully re...
Although natural language processing (NLP) can rapidly extract disease labels from radiology reports to create datasets for deep learning models, this may be less accurate than having radiologists manually review the images. In this study, we compare...
The performance of deep neural networks and the low costs of computational hardware has made computer vision a popular choice in many robotic systems. An attractive feature of deep-learned methods is their ability to cope with appearance changes caus...