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Medical Informatics

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Domain adaption of parsing for operative notes.

Journal of biomedical informatics
BACKGROUND: Full syntactic parsing of clinical text as a part of clinical natural language processing (NLP) is critical for a wide range of applications. Several robust syntactic parsers are publicly available to produce linguistic representations fo...

Stable feature selection for clinical prediction: exploiting ICD tree structure using Tree-Lasso.

Journal of biomedical informatics
Modern healthcare is getting reshaped by growing Electronic Medical Records (EMR). Recently, these records have been shown of great value towards building clinical prediction models. In EMR data, patients' diseases and hospital interventions are capt...

Secondary use of electronic health records for building cohort studies through top-down information extraction.

Journal of biomedical informatics
Controlled clinical trials are usually supported with an in-front data aggregation system, which supports the storage of relevant information according to the trial context within a highly structured environment. In contrast to the documentation of c...

Secure Secondary Use of Clinical Data with Cloud-based NLP Services. Towards a Highly Scalable Research Infrastructure.

Methods of information in medicine
OBJECTIVES: The secondary use of clinical data provides large opportunities for clinical and translational research as well as quality assurance projects. For such purposes, it is necessary to provide a flexible and scalable infrastructure that is co...

Support Vector Feature Selection for Early Detection of Anastomosis Leakage From Bag-of-Words in Electronic Health Records.

IEEE journal of biomedical and health informatics
The free text in electronic health records (EHRs) conveys a huge amount of clinical information about health state and patient history. Despite a rapidly growing literature on the use of machine learning techniques for extracting this information, li...

Systematic Poisoning Attacks on and Defenses for Machine Learning in Healthcare.

IEEE journal of biomedical and health informatics
Machine learning is being used in a wide range of application domains to discover patterns in large datasets. Increasingly, the results of machine learning drive critical decisions in applications related to healthcare and biomedicine. Such health-re...

An ontology-based annotation of cardiac implantable electronic devices to detect therapy changes in a national registry.

IEEE journal of biomedical and health informatics
The patient population benefitting from cardiac implantable electronic devices (CIEDs) is increasing. This study introduces a device annotation method that supports the consistent description of the functional attributes of cardiac devices and evalua...

Prioritising lexical patterns to increase axiomatisation in biomedical ontologies. The role of localisation and modularity.

Methods of information in medicine
INTRODUCTION: This article is part of the Focus Theme of METHODS of Information in Medicine on "Managing Interoperability and Complexity in Health Systems".

The Relevance of General Intelligence Measurement in Deep Learning for Healthcare.

Studies in health technology and informatics
The integration of artificial intelligence (AI) into medical informatics presents significant opportunities to enhance healthcare through data-driven diagnostics, predictive analytics, and personalized therapeutic recommendations. This paper examines...