AIMC Topic: PubMed

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An exploration into CTEPH medications: Combining natural language processing, embedding learning, in vitro models, and real-world evidence for drug repurposing.

PLoS computational biology Sep 12, 2024
BACKGROUND: In the modern era, the growth of scientific literature presents a daunting challenge for researchers to keep informed of advancements across multiple disciplines.
Computational Biology Chronic Disease Data Mining Drug Repositioning Hypertension, Pulmonary Natural Language Processing Pulmonary Embolism Neural Networks, Computer PubMed Machine Learning Humans
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Community knowledge graph abstraction for enhanced link prediction: A study on PubMed knowledge graph.

Journal of biomedical informatics Sep 10, 2024
OBJECTIVE: As new knowledge is produced at a rapid pace in the biomedical field, existing biomedical Knowledge Graphs (KGs) cannot be manually updated in a timely manner. Previous work in Natural Language Processing (NLP) has leveraged link predictio...
Natural Language Processing PubMed Knowledge Bases Humans Algorithms Data Mining
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EnzChemRED, a rich enzyme chemistry relation extraction dataset.

Scientific data Sep 9, 2024
Expert curation is essential to capture knowledge of enzyme functions from the scientific literature in FAIR open knowledgebases but cannot keep pace with the rate of new discoveries and new publications. In this work we present EnzChemRED, for Enzym...
PubMed Knowledge Bases Enzymes Databases, Protein Natural Language Processing
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VAIV bio-discovery service using transformer model and retrieval augmented generation.

BMC bioinformatics Aug 21, 2024
BACKGROUND: There has been a considerable advancement in AI technologies like LLM and machine learning to support biomedical knowledge discovery.
Search Engine Knowledge Discovery Data Mining Information Storage and Retrieval Neural Networks, Computer Machine Learning Natural Language Processing PubMed
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Artificial INtelligence to Support Informed DEcision-making (INSIDE) for Improved Literature Analysis in Oncology.

European urology focus Jun 13, 2024
BACKGROUND: Defining optimal therapeutic sequencing strategies in prostate cancer (PC) is challenging and may be assisted by artificial intelligence (AI)-based tools for an analysis of the medical literature.
Humans PubMed Medical Oncology Decision Making Prostatic Neoplasms Artificial Intelligence Male
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Improving biomedical Named Entity Recognition with additional external contexts.

Journal of biomedical informatics Jun 11, 2024
OBJECTIVE: Biomedical Named Entity Recognition (bio NER) is the task of recognizing named entities in biomedical texts. This paper introduces a new model that addresses bio NER by considering additional external contexts. Different from prior methods...
Medical Informatics Semantics PubMed Data Mining Algorithms Humans Natural Language Processing
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Enhancing the coverage of SemRep using a relation classification approach.

Journal of biomedical informatics May 21, 2024
OBJECTIVE: Relation extraction is an essential task in the field of biomedical literature mining and offers significant benefits for various downstream applications, including database curation, drug repurposing, and literature-based discovery. The b...
Data Mining Semantics MEDLINE Natural Language Processing PubMed Algorithms Humans Databases, Factual
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PubMed and beyond: biomedical literature search in the age of artificial intelligence.

EBioMedicine Feb 1, 2024
Biomedical research yields vast information, much of which is only accessible through the literature. Consequently, literature search is crucial for healthcare and biomedicine. Recent improvements in artificial intelligence (AI) have expanded functio...
Humans PubMed Artificial Intelligence Data Mining Delivery of Health Care Biomedical Research
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Trends and insights about cardiac arrest and artificial intelligence on PubMed using ChatGPT-4.

Resuscitation Jan 26, 2024
PubMed Humans Artificial Intelligence Heart Arrest
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Evidence of Age Estimation Procedures in Forensic Dentistry: Results from an Umbrella Review.

Medicina (Kaunas, Lithuania) Dec 25, 2023
: Age estimation is an important tool when dealing with human remains or undocumented minors. Although the skull, the skeleton or the hand-wrist are used in age estimation as maturity indicators, they often present a lack of good conditions for a cor...
Humans Databases, Factual Artificial Intelligence Forensic Dentistry PubMed Radiopharmaceuticals
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