AIMC Topic: Algorithms

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Versatile robotic probe calibration for position tracking in ultrasound imaging.

Physics in medicine and biology
Within the field of ultrasound-guided procedures, there are a number of methods for ultrasound probe calibration. While these methods are usually developed for a specific probe, they are in principle easily adapted to other probes. In practice, howev...

Multi-Step Protocol for Automatic Evaluation of Docking Results Based on Machine Learning Methods--A Case Study of Serotonin Receptors 5-HT(6) and 5-HT(7).

Journal of chemical information and modeling
Molecular docking, despite its undeniable usefulness in computer-aided drug design protocols and the increasing sophistication of tools used in the prediction of ligand-protein interaction energies, is still connected with a problem of effective resu...

Using Ontology Fingerprints to disambiguate gene name entities in the biomedical literature.

Database : the journal of biological databases and curation
Ambiguous gene names in the biomedical literature are a barrier to accurate information extraction. To overcome this hurdle, we generated Ontology Fingerprints for selected genes that are relevant for personalized cancer therapy. These Ontology Finge...

Intensity Estimation of Spontaneous Facial Action Units Based on Their Sparsity Properties.

IEEE transactions on cybernetics
Automatic measurement of spontaneous facial action units (AUs) defined by the facial action coding system (FACS) is a challenging problem. The recent FACS user manual defines 33 AUs to describe different facial activities and expressions. In spontane...

Comparison of Seven Methods for Boolean Factor Analysis and Their Evaluation by Information Gain.

IEEE transactions on neural networks and learning systems
An usual task in large data set analysis is searching for an appropriate data representation in a space of fewer dimensions. One of the most efficient methods to solve this task is factor analysis. In this paper, we compare seven methods for Boolean ...

A knowledge-based algorithm for automatic detection of cephalometric landmarks on CBCT images.

International journal of computer assisted radiology and surgery
PURPOSE: Cone-beam computed tomography (CBCT) is now an established component for 3D evaluation and treatment planning of patients with severe malocclusion and craniofacial deformities. Precision landmark plotting on 3D images for cephalometric analy...

Mean square delay dependent-probability-distribution stability analysis of neutral type stochastic neural networks.

ISA transactions
The aim of this manuscript is to investigate the mean square delay dependent-probability-distribution stability analysis of neutral type stochastic neural networks with time-delays. The time-delays are assumed to be interval time-varying and randomly...

Low-dimensional recurrent neural network-based Kalman filter for speech enhancement.

Neural networks : the official journal of the International Neural Network Society
This paper proposes a new recurrent neural network-based Kalman filter for speech enhancement, based on a noise-constrained least squares estimate. The parameters of speech signal modeled as autoregressive process are first estimated by using the pro...

NIEluter: Predicting peptides eluted from HLA class I molecules.

Journal of immunological methods
The immune system has evolved to make a diverse repertoire of peptides processed from self and foreign proteomes, which are displayed in antigen-binding grooves of major histocompatibility complex (MHC) proteins at cell surface for surveillance by T ...

Incremental learning for ν-Support Vector Regression.

Neural networks : the official journal of the International Neural Network Society
The ν-Support Vector Regression (ν-SVR) is an effective regression learning algorithm, which has the advantage of using a parameter ν on controlling the number of support vectors and adjusting the width of the tube automatically. However, compared to...