AIMC Topic: Animals

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The role of hydrodynamics in collective motions of fish schools and bioinspired underwater robots.

Journal of the Royal Society, Interface
Collective behaviour defines the lives of many animal species on the Earth. Underwater swarms span several orders of magnitude in size, from coral larvae and krill to tunas and dolphins. Agent-based algorithms have modelled collective movements of an...

Image Denoising of Low-Dose PET Mouse Scans with Deep Learning: Validation Study for Preclinical Imaging Applicability.

Molecular imaging and biology
PURPOSE: Positron emission tomography (PET) image quality can be improved by higher injected activity and/or longer acquisition time, but both may often not be practical in preclinical imaging. Common preclinical radioactive doses (10 MBq) have been ...

MLtox, online phototoxicity prediction webpage.

Toxicology in vitro : an international journal published in association with BIBRA
Phototoxicity, sometimes in the literature referred to as photo-irritation, is a chemically induced reaction requiring light. While it is generally accepted that phototoxicity testing can be performed in the majority of cases in vitro (i.e. without t...

Rapid automated 3-D pose estimation of larval zebrafish using a physical model-trained neural network.

PLoS computational biology
Quantitative ethology requires an accurate estimation of an organism's postural dynamics in three dimensions plus time. Technological progress over the last decade has made animal pose estimation in challenging scenarios possible with unprecedented d...

Cow key point detection in indoor housing conditions with a deep learning model.

Journal of dairy science
Lameness in dairy cattle is a costly and highly prevalent problem that affects all aspects of sustainable dairy production, including animal welfare. Automation of gait assessment would allow monitoring of locomotion in which the cows' walking patter...

Intravital microscopy visualizes innate immune crosstalk and function in tissue microenvironment.

European journal of immunology
Significant advances have been made in the field of intravital microscopy (IVM) on myeloid cells due to the growing number of validated fluorescent probes and reporter mice. IVM provides a visualization platform to directly observe cell behavior and ...

A Review of Machine Learning and Algorithmic Methods for Protein Phosphorylation Site Prediction.

Genomics, proteomics & bioinformatics
Post-translational modifications (PTMs) have key roles in extending the functional diversity of proteins and, as a result, regulating diverse cellular processes in prokaryotic and eukaryotic organisms. Phosphorylation modification is a vital PTM that...

A Concentric Tube Steerable Drilling Robot for Minimally Invasive Spinal Fixation of Osteoporotic Vertebrae.

IEEE transactions on bio-medical engineering
Spinal fixation with rigid pedicle screws have shown to be an effective treatment for many patients. However, this surgical option has been proved to be insufficient and will eventually fail for patients experiencing osteoporosis. This failure is mai...

Who is calling? Optimizing source identification from marmoset vocalizations with hierarchical machine learning classifiers.

Journal of the Royal Society, Interface
With their highly social nature and complex vocal communication system, marmosets are important models for comparative studies of vocal communication and, eventually, language evolution. However, our knowledge about marmoset vocalizations predominant...