AI Medical Compendium Topic

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Integration of Anatomy Ontologies and Evo-Devo Using Structured Markov Models Suggests a New Framework for Modeling Discrete Phenotypic Traits.

Systematic biology
Modeling discrete phenotypic traits for either ancestral character state reconstruction or morphology-based phylogenetic inference suffers from ambiguities of character coding, homology assessment, dependencies, and selection of adequate models. Thes...

An Open Science Approach to Artificial Intelligence in Healthcare.

Yearbook of medical informatics
OBJECTIVES: Artificial Intelligence (AI) offers significant potential for improving healthcare. This paper discusses how an "open science" approach to AI tool development, data sharing, education, and research can support the clinical adoption of AI ...

Cancer taxonomy: pathology beyond pathology.

European journal of cancer (Oxford, England : 1990)
The way we categorise and classify cancer types dictates not only the way we diagnose and treat patients but also many of our decisions on biomarker and drug development. In addition, cancer taxonomy proves the ground truth for future discoveries in ...

Discriminative multi-source adaptation multi-feature co-regression for visual classification.

Neural networks : the official journal of the International Neural Network Society
Learning an effective visual classifier from few labeled samples is a challenging problem, which has motivated the multi-source adaptation scheme in machine learning. While the advantages of multi-source adaptation have been widely recognized, there ...

Robust capped L1-norm twin support vector machine.

Neural networks : the official journal of the International Neural Network Society
Twin support vector machine (TWSVM) is a classical and effective classifier for binary classification. However, its robustness cannot be guaranteed due to the utilization of squared L2-norm distance that can usually exaggerate the influence of outlie...

Why Cohen's Kappa should be avoided as performance measure in classification.

PloS one
We show that Cohen's Kappa and Matthews Correlation Coefficient (MCC), both extended and contrasted measures of performance in multi-class classification, are correlated in most situations, albeit can differ in others. Indeed, although in the symmetr...

Estimating classification accuracy in positive-unlabeled learning: characterization and correction strategies.

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing
Accurately estimating performance accuracy of machine learning classifiers is of fundamental importance in biomedical research with potentially societal consequences upon the deployment of bestperforming tools in everyday life. Although classificatio...

Expert-level sleep scoring with deep neural networks.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVES: Scoring laboratory polysomnography (PSG) data remains a manual task of visually annotating 3 primary categories: sleep stages, sleep disordered breathing, and limb movements. Attempts to automate this process have been hampered by the com...

Machine learning for psychiatric patient triaging: an investigation of cascading classifiers.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Develop an approach, One-class-at-a-time, for triaging psychiatric patients using machine learning on textual patient records. Our approach aims to automate the triaging process and reduce expert effort while providing high classification ...

Reproducibility of importance extraction methods in neural network based fMRI classification.

NeuroImage
Recent advances in machine learning allow faster training, improved performance and increased interpretability of classification techniques. Consequently, their application in neuroscience is rapidly increasing. While classification approaches have p...