AIMC Topic: Drug Discovery

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ChemGrapher: Optical Graph Recognition of Chemical Compounds by Deep Learning.

Journal of chemical information and modeling
In drug discovery, knowledge of the graph structure of chemical compounds is essential. Many thousands of scientific articles and patents in chemistry and pharmaceutical sciences have investigated chemical compounds, but in many cases, the details of...

Viral pandemic preparedness: A pluripotent stem cell-based machine-learning platform for simulating SARS-CoV-2 infection to enable drug discovery and repurposing.

Stem cells translational medicine
Infection with the SARS-CoV-2 virus has rapidly become a global pandemic for which we were not prepared. Several clinical trials using previously approved drugs and drug combinations are urgently under way to improve the current situation. A vaccine ...

High-content image generation for drug discovery using generative adversarial networks.

Neural networks : the official journal of the International Neural Network Society
Immense amount of high-content image data generated in drug discovery screening requires computationally driven automated analysis. Emergence of advanced machine learning algorithms, like deep learning models, has transformed the interpretation and a...

Selecting machine-learning scoring functions for structure-based virtual screening.

Drug discovery today. Technologies
Interest in docking technologies has grown parallel to the ever increasing number and diversity of 3D models for macromolecular therapeutic targets. Structure-Based Virtual Screening (SBVS) aims at leveraging these experimental structures to discover...

Artificial intelligence in COVID-19 drug repurposing.

The Lancet. Digital health
Drug repurposing or repositioning is a technique whereby existing drugs are used to treat emerging and challenging diseases, including COVID-19. Drug repurposing has become a promising approach because of the opportunity for reduced development timel...

A learning-based method for drug-target interaction prediction based on feature representation learning and deep neural network.

BMC bioinformatics
BACKGROUND: Drug-target interaction prediction is of great significance for narrowing down the scope of candidate medications, and thus is a vital step in drug discovery. Because of the particularity of biochemical experiments, the development of new...

3-D Inorganic Crystal Structure Generation and Property Prediction via Representation Learning.

Journal of chemical information and modeling
Generative models have been successfully used to synthesize completely novel images, text, music, and speech. As such, they present an exciting opportunity for the design of new materials for functional applications. So far, generative deep-learning ...

A Deep-Learning View of Chemical Space Designed to Facilitate Drug Discovery.

Journal of chemical information and modeling
Drug discovery projects entail cycles of design, synthesis, and testing that yield a series of chemically related small molecules whose properties, such as binding affinity to a given target protein, are progressively tailored to a particular drug di...

A new advanced in silico drug discovery method for novel coronavirus (SARS-CoV-2) with tensor decomposition-based unsupervised feature extraction.

PloS one
BACKGROUND: COVID-19 is a critical pandemic that has affected human communities worldwide, and there is an urgent need to develop effective drugs. Although there are a large number of candidate drug compounds that may be useful for treating COVID-19,...

Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis.

Scientific reports
Quantitatively determining in vivo achievable drug concentrations in targeted organs of animal models and subsequent target engagement confirmation is a challenge to drug discovery and translation due to lack of bioassay technologies that can discrim...