AIMC Topic: Electronic Health Records

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Defining the distance between diseases using SNOMED CT embeddings.

Journal of biomedical informatics
Characterizing disease relationships is essential to biomedical research to understand disease etiology and improve clinical decision-making. Measurements of distance between disease pairs enable valuable research tasks, such as subgrouping patients ...

Evaluation of the portability of computable phenotypes with natural language processing in the eMERGE network.

Scientific reports
The electronic Medical Records and Genomics (eMERGE) Network assessed the feasibility of deploying portable phenotype rule-based algorithms with natural language processing (NLP) components added to improve performance of existing algorithms using el...

FedSepsis: A Federated Multi-Modal Deep Learning-Based Internet of Medical Things Application for Early Detection of Sepsis from Electronic Health Records Using Raspberry Pi and Jetson Nano Devices.

Sensors (Basel, Switzerland)
The concept of the Internet of Medical Things brings a promising option to utilize various electronic health records stored in different medical devices and servers to create practical but secure clinical decision support systems. To achieve such a s...

Machine learning enabled subgroup analysis with real-world data to inform clinical trial eligibility criteria design.

Scientific reports
Overly restrictive eligibility criteria for clinical trials may limit the generalizability of the trial results to their target real-world patient populations. We developed a novel machine learning approach using large collections of real-world data ...

Negation detection in Dutch clinical texts: an evaluation of rule-based and machine learning methods.

BMC bioinformatics
When developing models for clinical information retrieval and decision support systems, the discrete outcomes required for training are often missing. These labels need to be extracted from free text in electronic health records. For this extraction ...

Natural language processing for clinical notes in dentistry: A systematic review.

Journal of biomedical informatics
OBJECTIVE: To identify and synthesise research on applications of natural language processing (NLP) for information extraction and retrieval from clinical notes in dentistry.

Clinical research staff perceptions on a natural language processing-driven tool for eligibility prescreening: An iterative usability assessment.

International journal of medical informatics
BACKGROUND: Participant recruitment is a barrier to successful clinical research. One strategy to improve recruitment is to conduct eligibility prescreening, a resource-intensive process where clinical research staff manually reviews electronic healt...

Multimodal Data Matters: Language Model Pre-Training Over Structured and Unstructured Electronic Health Records.

IEEE journal of biomedical and health informatics
As two important textual modalities in electronic health records (EHR), both structured data (clinical codes) and unstructured data (clinical narratives) have recently been increasingly applied to the healthcare domain. Most existing EHR-oriented stu...

Exploratory pharmacovigilance with machine learning in big patient data: A focused scoping review.

Basic & clinical pharmacology & toxicology
BACKGROUND: Machine learning can operationalize the rich and complex data in electronic patient records for exploratory pharmacovigilance endeavours.

Adverse drug event detection using natural language processing: A scoping review of supervised learning methods.

PloS one
To reduce adverse drug events (ADEs), hospitals need a system to support them in monitoring ADE occurrence routinely, rapidly, and at scale. Natural language processing (NLP), a computerized approach to analyze text data, has shown promising results ...