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Informatics

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Applied Informatics Decision Support Tool for Mortality Predictions in Patients With Cancer.

JCO clinical cancer informatics
PURPOSE: With rapidly evolving treatment options in cancer, the complexity in the clinical decision-making process for oncologists represents a growing challenge magnified by oncologists' disposition of intuition-based assessment of treatment risks a...

Deep Learning Based Regression and Multiclass Models for Acute Oral Toxicity Prediction with Automatic Chemical Feature Extraction.

Journal of chemical information and modeling
Median lethal death, LD, is a general indicator of compound acute oral toxicity (AOT). Various in silico methods were developed for AOT prediction to reduce costs and time. In this study, we developed an improved molecular graph encoding convolutiona...

A New Approach for Advertising CTR Prediction Based on Deep Neural Network via Attention Mechanism.

Computational and mathematical methods in medicine
Click-through rate prediction is critical in Internet advertising and affects web publisher's profits and advertiser's payment. The traditional method of obtaining features using feature extraction did not consider the sparseness of advertising data ...

Machine learning in chemoinformatics and drug discovery.

Drug discovery today
Chemoinformatics is an established discipline focusing on extracting, processing and extrapolating meaningful data from chemical structures. With the rapid explosion of chemical 'big' data from HTS and combinatorial synthesis, machine learning has be...

Reliable and Performant Identification of Low-Energy Conformers in the Gas Phase and Water.

Journal of chemical information and modeling
Prediction of compound properties from structure via quantitative structure-activity relationship and machine-learning approaches is an important computational chemistry task in small-molecule drug research. Though many such properties are dependent ...

Conformal Regression for Quantitative Structure-Activity Relationship Modeling-Quantifying Prediction Uncertainty.

Journal of chemical information and modeling
Making predictions with an associated confidence is highly desirable as it facilitates decision making and resource prioritization. Conformal regression is a machine learning framework that allows the user to define the required confidence and delive...

A Survey of Multi-task Learning Methods in Chemoinformatics.

Molecular informatics
Despite the increasing volume of available data, the proportion of experimentally measured data remains small compared to the virtual chemical space of possible chemical structures. Therefore, there is a strong interest in simultaneously predicting d...

Converging a Knowledge-Based Scoring Function: DrugScore.

Journal of chemical information and modeling
We present DrugScore, a new version of the knowledge-based scoring function DrugScore, which builds upon the same formalism used to derive DrugScore but exploits a training data set of nearly 40 000 X-ray complex structures, a highly diverse and the,...

Evaluation of Cross-Validation Strategies in Sequence-Based Binding Prediction Using Deep Learning.

Journal of chemical information and modeling
Binding prediction between targets and drug-like compounds through deep neural networks has generated promising results in recent years, outperforming traditional machine learning-based methods. However, the generalization capability of these classif...

Public Health and Epidemiology Informatics: Can Artificial Intelligence Help Future Global Challenges? An Overview of Antimicrobial Resistance and Impact of Climate Change in Disease Epidemiology.

Yearbook of medical informatics
OBJECTIVES: To provide an oveiview of the current application of artificial intelligence (AI) in the field of public health and epidemiology, with a special focus on antimicrobial resistance and the impact of climate change in disease epidemiology. B...