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Organelles

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Virtual organelle self-coding for fluorescence imaging via adversarial learning.

Journal of biomedical optics
SIGNIFICANCE: Our study introduces an application of deep learning to virtually generate fluorescence images to reduce the burdens of cost and time from considerable effort in sample preparation related to chemical fixation and staining.

OrgaNet: A Robust Network for Subcellular Organelles Classification in Fluorescence Microscopy Images.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Automatic identification of subcellular compartments of proteins in fluorescence microscopy images is an important task to quantitatively evaluate cellular processes. A common problem for the development of deep learning based classifiers is that the...

A reference library for assigning protein subcellular localizations by image-based machine learning.

The Journal of cell biology
Confocal micrographs of EGFP fusion proteins localized at key cell organelles in murine and human cells were acquired for use as subcellular localization landmarks. For each of the respective 789,011 and 523,319 optically validated cell images, morph...

Prediction of Sequential Organelles Localization under Imbalance using A Balanced Deep U-Net.

Scientific reports
Assessing the structure and function of organelles in living organisms of the primitive unicellular red algae Cyanidioschyzon merolae on three-dimensional sequential images demands a reliable automated technique in the class imbalance among various c...

AI-powered transmitted light microscopy for functional analysis of live cells.

Scientific reports
Transmitted light microscopy can readily visualize the morphology of living cells. Here, we introduce artificial-intelligence-powered transmitted light microscopy (AIM) for subcellular structure identification and labeling-free functional analysis of...

Incorporating organelle correlations into semi-supervised learning for protein subcellular localization prediction.

Bioinformatics (Oxford, England)
MOTIVATION: Bioimages of subcellular protein distribution as a new data source have attracted much attention in the field of automated prediction of proteins subcellular localization. Performance of existing systems is significantly limited by the sm...