AIMC Topic: Software

Clear Filters Showing 1161 to 1170 of 3675 articles

PhenoApt leverages clinical expertise to prioritize candidate genes via machine learning.

American journal of human genetics
In recent years, exome sequencing (ES) has shown great utility in the diagnoses of Mendelian disorders. However, after rigorous filtering, a typical ES analysis still involves the interpretation of hundreds of variants, which greatly hinders the rapi...

Label-free imaging flow cytometry for analysis and sorting of enzymatically dissociated tissues.

Scientific reports
Biomedical research relies on identification and isolation of specific cell types using molecular biomarkers and sorting methods such as fluorescence or magnetic activated cell sorting. Labelling processes potentially alter the cells' properties and ...

PCaGuard: A Software Platform to Support Optimal Management of Prostate Cancer.

Applied clinical informatics
BACKGROUND AND OBJECTIVE: Prostate cancer (PCa) is a severe public health issue and the most common cancer worldwide in men. Early diagnosis can lead to early treatment and long-term survival. The addition of the multiparametric magnetic resonance im...

CellSeg: a robust, pre-trained nucleus segmentation and pixel quantification software for highly multiplexed fluorescence images.

BMC bioinformatics
BACKGROUND: Algorithmic cellular segmentation is an essential step for the quantitative analysis of highly multiplexed tissue images. Current segmentation pipelines often require manual dataset annotation and additional training, significant paramete...

DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics.

PLoS computational biology
Improvements in microscopy software and hardware have dramatically increased the pace of image acquisition, making analysis a major bottleneck in generating quantitative, single-cell data. Although tools for segmenting and tracking bacteria within ti...

Comparing two artificial intelligence software packages for normative brain volumetry in memory clinic imaging.

Neuroradiology
PURPOSE: To compare two artificial intelligence software packages performing normative brain volumetry and explore whether they could differently impact dementia diagnostics in a clinical context.

Evaluating pointwise reliability of machine learning prediction.

Journal of biomedical informatics
Interest in Machine Learning applications to tackle clinical and biological problems is increasing. This is driven by promising results reported in many research papers, the increasing number of AI-based software products, and by the general interest...

StrVCTVRE: A supervised learning method to predict the pathogenicity of human genome structural variants.

American journal of human genetics
Whole-genome sequencing resolves many clinical cases where standard diagnostic methods have failed. However, at least half of these cases remain unresolved after whole-genome sequencing. Structural variants (SVs; genomic variants larger than 50 base ...

Harnessing protein folding neural networks for peptide-protein docking.

Nature communications
Highly accurate protein structure predictions by deep neural networks such as AlphaFold2 and RoseTTAFold have tremendous impact on structural biology and beyond. Here, we show that, although these deep learning approaches have originally been develop...

Mini-batch optimization enables training of ODE models on large-scale datasets.

Nature communications
Quantitative dynamic models are widely used to study cellular signal processing. A critical step in modelling is the estimation of unknown model parameters from experimental data. As model sizes and datasets are steadily growing, established paramete...