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Tutorial on Protein Ontology Resources.
Methods in molecular biology (Clifton, N.J.)
Jan 1, 2017
The Protein Ontology (PRO) is the reference ontology for proteins in the Open Biomedical Ontologies (OBO) foundry and consists of three sub-ontologies representing protein classes of homologous genes, proteoforms (e.g., splice isoforms, sequence vari...
An Efficient Semi-supervised Learning Approach to Predict SH2 Domain Mediated Interactions.
Methods in molecular biology (Clifton, N.J.)
Jan 1, 2017
Src homology 2 (SH2) domain is an important subclass of modular protein domains that plays an indispensable role in several biological processes in eukaryotes. SH2 domains specifically bind to the phosphotyrosine residue of their binding peptides to ...
MSLVP: prediction of multiple subcellular localization of viral proteins using a support vector machine.
Molecular bioSystems
Jul 19, 2016
Knowledge of the subcellular location (SCL) of viral proteins in the host cell is important for understanding their function in depth. Therefore, we have developed "MSLVP", a two-tier prediction algorithm for predicting multiple SCLs of viral protein...
The Plant Ontology: A Tool for Plant Genomics.
Methods in molecular biology (Clifton, N.J.)
Jan 1, 2016
The use of controlled, structured vocabularies (ontologies) has become a critical tool for scientists in the post-genomic era of massive datasets. Adoption and integration of common vocabularies and annotation practices enables cross-species comparat...
Proactive Support of Internet Browsing when Searching for Relevant Health Information.
Studies in health technology and informatics
Jan 1, 2015
Many people use the Internet as one of the primary sources of health information. This is due to the high volume and easy access of freely available information regarding diseases, diagnoses and treatments. However, users may find it difficult to ret...
Semantic retrieval and navigation in clinical document collections.
Studies in health technology and informatics
Jan 1, 2015
Patients with chronic diseases undergo numerous in- and outpatient treatment periods, and therefore many documents accumulate in their electronic records. We report on an on-going project focussing on the semantic enrichment of medical texts, in orde...
Expertizer: a tool to assess the expert level of online health websites.
Studies in health technology and informatics
Jan 1, 2015
Health-related Web sites have become a primary resource to search for information on diseases, diagnoses or treatment options. Various Web sites offer a great variety of such information. However, lay people might have difficulties to assess whether ...
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