AIMC Topic: Animals

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Detecting spatially co-expressed gene clusters with functional coherence by graph-regularized convolutional neural network.

Bioinformatics (Oxford, England)
MOTIVATION: Clustering spatial-resolved gene expression is an essential analysis to reveal gene activities in the underlying morphological context by their functional roles. However, conventional clustering analysis does not consider gene expression ...

DeepKG: an end-to-end deep learning-based workflow for biomedical knowledge graph extraction, optimization and applications.

Bioinformatics (Oxford, England)
SUMMARY: DeepKG is an end-to-end deep learning-based workflow that helps researchers automatically mine valuable knowledge in biomedical literature. Users can utilize it to establish customized knowledge graphs in specified domains, thus facilitating...

Artificial Intelligence for Biology.

Integrative and comparative biology
Despite efforts to integrate research across different subdisciplines of biology, the scale of integration remains limited. We hypothesize that future generations of Artificial Intelligence (AI) technologies specifically adapted for biological scienc...

The Axes of Life: A Roadmap for Understanding Dynamic Multiscale Systems.

Integrative and comparative biology
The biological challenges facing humanity are complex, multi-factorial, and are intimately tied to the future of our health, welfare, and stewardship of the Earth. Tackling problems in diverse areas, such as agriculture, ecology, and health care requ...

Deep Learning for Reintegrating Biology.

Integrative and comparative biology
The goal of this vision paper is to investigate the possible role that advanced machine learning techniques, especially deep learning (DL), could play in the reintegration of various biological disciplines. To achieve this goal, a series of operation...

Spatiotemporal absorption fluctuation imaging based on U-Net.

Journal of biomedical optics
SIGNIFICANCE: Full-field optical angiography is critical for vascular disease research and clinical diagnosis. Existing methods struggle to improve the temporal and spatial resolutions simultaneously.

A connectivity-constrained computational account of topographic organization in primate high-level visual cortex.

Proceedings of the National Academy of Sciences of the United States of America
Inferotemporal (IT) cortex in humans and other primates is topographically organized, containing multiple hierarchically organized areas selective for particular domains, such as faces and scenes. This organization is commonly viewed in terms of evol...

Scan-less machine-learning-enabled incoherent microscopy for minimally-invasive deep-brain imaging.

Optics express
Deep-brain microscopy is strongly limited by the size of the imaging probe, both in terms of achievable resolution and potential trauma due to surgery. Here, we show that a segment of an ultra-thin multi-mode fiber (cannula) can replace the bulky mic...

Categorical Perception: A Groundwork for Deep Learning.

Neural computation
Classification is one of the major tasks that deep learning is successfully tackling. Categorization is also a fundamental cognitive ability. A well-known perceptual consequence of categorization in humans and other animals, categorical perception, i...