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Anopheles

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An autoencoder and artificial neural network-based method to estimate parity status of wild mosquitoes from near-infrared spectra.

PloS one
After mating, female mosquitoes need animal blood to develop their eggs. In the process of acquiring blood, they may acquire pathogens, which may cause different diseases in humans such as malaria, zika, dengue, and chikungunya. Therefore, knowing th...

Predicting geographic location from genetic variation with deep neural networks.

eLife
Most organisms are more closely related to nearby than distant members of their species, creating spatial autocorrelations in genetic data. This allows us to predict the location of origin of a genetic sample by comparing it to a set of samples of kn...

Discovery of Ongoing Selective Sweeps within Anopheles Mosquito Populations Using Deep Learning.

Molecular biology and evolution
Identification of partial sweeps, which include both hard and soft sweeps that have not currently reached fixation, provides crucial information about ongoing evolutionary responses. To this end, we introduce partialS/HIC, a deep learning method to d...

Geometric morphometrics and machine learning as tools for the identification of sibling mosquito species of the Maculipennis complex (Anopheles).

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
Geometric morphometrics allows researchers to use the specific software to quantify and to visualize morphological differences between taxa from insect wings. Our objective was to assess wing geometry to distinguish four Anopheles sibling species of ...

Deep learning and wing interferential patterns identify Anopheles species and discriminate amongst Gambiae complex species.

Scientific reports
We present a new and innovative identification method based on deep learning of the wing interferential patterns carried by mosquitoes of the Anopheles genus to classify and assign 20 Anopheles species, including 13 malaria vectors. We provide additi...

Reagent-free detection of Plasmodium falciparum malaria infections in field-collected mosquitoes using mid-infrared spectroscopy and machine learning.

Scientific reports
Field-derived metrics are critical for effective control of malaria, particularly in sub-Saharan Africa where the disease kills over half a million people yearly. One key metric is entomological inoculation rate, a direct measure of transmission inte...

Predicting the age of field mosquitoes using mass spectrometry and deep learning.

Science advances
Mosquito-borne diseases like malaria are rising globally, and improved mosquito vector surveillance is needed. Survival of mosquitoes is key for epidemiological monitoring of malaria transmission and evaluation of vector control strategies targeting...

Temperature dependence of mosquitoes: Comparing mechanistic and machine learning approaches.

PLoS neglected tropical diseases
Mosquito vectors of pathogens (e.g., Aedes, Anopheles, and Culex spp. which transmit dengue, Zika, chikungunya, West Nile, malaria, and others) are of increasing concern for global public health. These vectors are geographically shifting under climat...

Discrimination of inherent characteristics of susceptible and resistant strains of Anopheles gambiae by explainable artificial intelligence analysis of flight trajectories.

Scientific reports
Understanding mosquito behaviours is vital for the development of insecticide-treated nets (ITNs), which have been successfully deployed in sub-Saharan Africa to reduce disease transmission, particularly malaria. However, rising insecticide resistanc...

Improving Malaria diagnosis through interpretable customized CNNs architectures.

Scientific reports
Malaria, which is spread via female Anopheles mosquitoes and is brought on by the Plasmodium parasite, persists as a serious illness, especially in areas with a high mosquito density. Traditional detection techniques, like examining blood samples wit...