AIMC Topic: Biological Ontologies

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[Stochastic simulation of the process of matching of the ages of the human and the experimental mammalian].

Advances in gerontology = Uspekhi gerontologii
The aim of the article is to work out the simple approach for matching of the ages of the human and mammalian. The model is based on the analysis of the counting processes of the proper ontogenetic events (such as the emergence of the first molars, t...

An automatic method for the enrichment of DICOM metadata using biomedical ontologies.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
This work is a novel contribution for enriching medical images using semantic annotations with a strategy for unifying different ontologies and instances of DICOM medical files. We present the L-MOM library (Library for Mapping of Ontological Metadat...

A reusable ontology for primitive and complex HL7 FHIR data types.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
HL7(®) FHIR(®) standard is a new standard aiming to offer more flexible interoperability mechanisms. We present a stand-alone RDF vocabulary as an OWL ontology that defines the primitive and complex data types of the FHIR framework, alongside their v...

Using Semantic Association to Extend and Infer Literature-Oriented Relativity Between Terms.

IEEE/ACM transactions on computational biology and bioinformatics
Relative terms often appear together in the literature. Methods have been presented for weighting relativity of pairwise terms by their co-occurring literature and inferring new relationship. Terms in the literature are also in the directed acyclic g...

Mining literatures to discover novel multiple biological associations in a disease context.

International journal of data mining and bioinformatics
The text mining methods proposed to discover associations between pairs of biological entities by mining a scientific literature often extract associations already existing in the literature, whereas their extensions supervise too much the discovery ...

Building an effective ontology for assistive technology.

Studies in health technology and informatics
The aim of this paper was to develop and validate an ontology for one class of assistive technology (AT), namely physically controllable pointing devices, using the Delphi method. Six occupational therapists with AT expertise identified important ite...

OntoMama: An Ontology Applied to Breast Cancer.

Studies in health technology and informatics
This article describes the process of building an ontology to assist medical students and professionals specialized in Oncology. The ontology allows the user to obtain knowledge more quickly and thus assist professionals in their decision-making.

DServO: A Peer-to-Peer-based Approach to Biomedical Ontology Repositories.

Studies in health technology and informatics
We present in this poster an extension of the ServO ontology server system, which adopts a decentralized Peer-To-Peer approach for managing multiple heterogeneous knowledge organization systems. It relies on the use of the JXTA protocol coupled with ...

Development of an Ontology to Recommend Exercises from Conceptual Maps.

Studies in health technology and informatics
The recommendation of exercise plans requires several variables to be considered (e.g., patient's conditions and preferences) and are normally complex to analyze. To facilitate this analysis we proposed the creation of an ontology to assist professio...

Textual Definitions in the Leukemia Domain: Methodological Guidelines for Biomedical Ontologies.

Studies in health technology and informatics
The goal of our study is to establish methodological guidelines for the formulation of definitions in biomedical ontologies thatare not so common in the field of Library & Information Science.