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SAFE: SPARQL Federation over RDF Data Cubes with Access Control.

Journal of biomedical semantics
BACKGROUND: Several query federation engines have been proposed for accessing public Linked Open Data sources. However, in many domains, resources are sensitive and access to these resources is tightly controlled by stakeholders; consequently, privac...

Supporting Regularized Logistic Regression Privately and Efficiently.

PloS one
As one of the most popular statistical and machine learning models, logistic regression with regularization has found wide adoption in biomedicine, social sciences, information technology, and so on. These domains often involve data of human subjects...

Ethical challenges in the use of social service robots for elderly people.

Zeitschrift fur Gerontologie und Geriatrie
Socially assistive robots are increasingly discussed as solutions in care and domestic use for the support of senior adults; however, this raises ethical questions which hitherto have not been considered or were not predictable. The most important qu...

Optimizing annotation resources for natural language de-identification via a game theoretic framework.

Journal of biomedical informatics
OBJECTIVE: Electronic medical records (EMRs) are increasingly repurposed for activities beyond clinical care, such as to support translational research and public policy analysis. To mitigate privacy risks, healthcare organizations (HCOs) aim to remo...

A novel fuzzy logic-based image steganography method to ensure medical data security.

Computers in biology and medicine
This study aims to secure medical data by combining them into one file format using steganographic methods. The electroencephalogram (EEG) is selected as hidden data, and magnetic resonance (MR) images are also used as the cover image. In addition to...

Creation of a new longitudinal corpus of clinical narratives.

Journal of biomedical informatics
The 2014 i2b2/UTHealth Natural Language Processing (NLP) shared task featured a new longitudinal corpus of 1304 records representing 296 diabetic patients. The corpus contains three cohorts: patients who have a diagnosis of coronary artery disease (C...

A context-aware approach for progression tracking of medical concepts in electronic medical records.

Journal of biomedical informatics
Electronic medical records (EMRs) for diabetic patients contain information about heart disease risk factors such as high blood pressure, cholesterol levels, and smoking status. Discovering the described risk factors and tracking their progression ov...

Hidden Markov model using Dirichlet process for de-identification.

Journal of biomedical informatics
For the 2014 i2b2/UTHealth de-identification challenge, we introduced a new non-parametric Bayesian hidden Markov model using a Dirichlet process (HMM-DP). The model intends to reduce task-specific feature engineering and to generalize well to new da...

Comparison of UMLS terminologies to identify risk of heart disease using clinical notes.

Journal of biomedical informatics
The second track of the 2014 i2b2 challenge asked participants to automatically identify risk factors for heart disease among diabetic patients using natural language processing techniques for clinical notes. This paper describes a rule-based system ...