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Diagnosis

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A Semi-Automatic Framework to Identify Abnormal States in EHR Narratives.

Studies in health technology and informatics
Disease ontology, defined as a causal chain of abnormal states, is believed to be a valuable knowledge base in medical information systems. Automatic mapping between electronic health records (EHR) and disease ontology is indispensable for applying d...

Efficient and Privacy-Preserving Online Medical Prediagnosis Framework Using Nonlinear SVM.

IEEE journal of biomedical and health informatics
With the advances of machine learning algorithms and the pervasiveness of network terminals, the online medical prediagnosis system, which can provide the diagnosis of healthcare provider anywhere anytime, has attracted considerable interest recently...

Developing a Standards-Based Information Model for Representing Computable Diagnostic Criteria: A Feasibility Study of the NQF Quality Data Model.

Studies in health technology and informatics
The lack of a standards-based information model has been recognized as a major barrier for representing computable diagnostic criteria. In this paper we describe our efforts in examining the feasibility of the Quality Data Model (QDM)-developed by th...

Automatic Generation of Conditional Diagnostic Guidelines.

AMIA ... Annual Symposium proceedings. AMIA Symposium
The diagnostic workup for many diseases can be extraordinarily nuanced, and as such reference material text often contains extensive information regarding when it is appropriate to have a patient undergo a given procedure. In this work we employ a th...

Dynamic regulation of RNA editing in human brain development and disease.

Nature neuroscience
RNA editing is increasingly recognized as a molecular mechanism regulating RNA activity and recoding proteins. Here we surveyed the global landscape of RNA editing in human brain tissues and identified three unique patterns of A-to-I RNA editing rate...

Avoiding Overfitting in Deep Neural Networks for Clinical Opinions Generation from General Blood Test Results.

Studies in health technology and informatics
We have used deep neural networks (DNNs) to generate clinical opinions from general blood test results. DNNs have overfitting problem in general. We believe the complex structure of DNN and insufficient data to be the major reasons of overfitting in ...

An inference method from multi-layered structure of biomedical data.

BMC medical informatics and decision making
BACKGROUND: Biological system is a multi-layered structure of omics with genome, epigenome, transcriptome, metabolome, proteome, etc., and can be further stretched to clinical/medical layers such as diseasome, drugs, and symptoms. One advantage of om...

Network-based analysis of diagnosis progression patterns using claims data.

Scientific reports
In recent years, several network models have been introduced to elucidate the relationships between diseases. However, important risk factors that contribute to many human diseases, such as age, gender and prior diagnoses, have not been considered in...