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Epidemics

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Research of Epidemic Big Data Based on Improved Deep Convolutional Neural Network.

Computational and mathematical methods in medicine
In recent years, with the acceleration of the aging process and the aggravation of life pressure, the proportion of chronic epidemics has gradually increased. A large amount of medical data will be generated during the hospitalization of diabetics. I...

Dynamics and Development of the COVID-19 Epidemic in the United States: A Compartmental Model Enhanced With Deep Learning Techniques.

Journal of medical Internet research
BACKGROUND: Compartmental models dominate epidemic modeling. Transmission parameters between compartments are typically estimated through stochastic parameterization processes that depends on detailed statistics of transmission characteristics, which...

Network inference from population-level observation of epidemics.

Scientific reports
Using the continuous-time susceptible-infected-susceptible (SIS) model on networks, we investigate the problem of inferring the class of the underlying network when epidemic data is only available at population-level (i.e., the number of infected ind...

Predicting malaria epidemics in Burkina Faso with machine learning.

PloS one
Accurately forecasting the case rate of malaria would enable key decision makers to intervene months before the onset of any outbreak, potentially saving lives. Until now, methods that forecast malaria have involved complicated numerical simulations ...

Estimation of COVID-19 epidemic curves using genetic programming algorithm.

Health informatics journal
This paper investigates the possibility of the implementation of Genetic Programming (GP) algorithm on a publicly available COVID-19 data set, in order to obtain mathematical models which could be used for estimation of confirmed, deceased, and recov...

Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology.

Nucleic acids research
The Mouse Genome Database (MGD; http://www.informatics.jax.org) is the community model organism knowledgebase for the laboratory mouse, a widely used animal model for comparative studies of the genetic and genomic basis for human health and disease. ...

A deep learning based surrogate model for the parameter identification problem in probabilistic cellular automaton epidemic models.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: an accurate estimation of the epidemiological model coefficients helps understand the basic principles of disease spreading. Some studies showed that dozens of hours are needed to simulate the traditional probabilistic cellu...

Assessing the Outbreak Risk of Epidemics Using Fuzzy Evidential Reasoning.

Risk analysis : an official publication of the Society for Risk Analysis
Epidemic diseases (EDs) present a significant but challenging risk endangering public health, evidenced by the outbreak of COVID-19. Compared to other risks affecting public health such as flooding, EDs attract little attention in terms of risk asses...

The Infectious Disease Ontology in the age of COVID-19.

Journal of biomedical semantics
BACKGROUND: Effective response to public health emergencies, such as we are now experiencing with COVID-19, requires data sharing across multiple disciplines and data systems. Ontologies offer a powerful data sharing tool, and this holds especially f...

Toward a systematic conflict resolution framework for ontologies.

Journal of biomedical semantics
BACKGROUND: The ontology authoring step in ontology development involves having to make choices about what subject domain knowledge to include. This may concern sorting out ontological differences and making choices between conflicting axioms due to ...