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Information Storage and Retrieval

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Encoding sequential information in semantic space models: comparing holographic reduced representation and random permutation.

Computational intelligence and neuroscience
Circular convolution and random permutation have each been proposed as neurally plausible binding operators capable of encoding sequential information in semantic memory. We perform several controlled comparisons of circular convolution and random pe...

An Evaluation of Patient Safety Event Report Categories Using Unsupervised Topic Modeling.

Methods of information in medicine
OBJECTIVE: Patient safety event data repositories have the potential to dramatically improve safety if analyzed and leveraged appropriately. These safety event reports often consist of both structured data, such as general event type categories, and ...

Building bridges across electronic health record systems through inferred phenotypic topics.

Journal of biomedical informatics
OBJECTIVE: Data in electronic health records (EHRs) is being increasingly leveraged for secondary uses, ranging from biomedical association studies to comparative effectiveness. To perform studies at scale and transfer knowledge from one institution ...

Collating the knowledge base for core outcome set development: developing and appraising the search strategy for a systematic review.

BMC medical research methodology
BACKGROUND: The COMET (Core Outcome Measures in Effectiveness Trials) Initiative is developing a publicly accessible online resource to collate the knowledge base for core outcome set development (COS) and the applied work from different health condi...

Learning document semantic representation with hybrid deep belief network.

Computational intelligence and neuroscience
High-level abstraction, for example, semantic representation, is vital for document classification and retrieval. However, how to learn document semantic representation is still a topic open for discussion in information retrieval and natural languag...

miRBoost: boosting support vector machines for microRNA precursor classification.

RNA (New York, N.Y.)
Identification of microRNAs (miRNAs) is an important step toward understanding post-transcriptional gene regulation and miRNA-related pathology. Difficulties in identifying miRNAs through experimental techniques combined with the huge amount of data ...

USI: a fast and accurate approach for conceptual document annotation.

BMC bioinformatics
BACKGROUND: Semantic approaches such as concept-based information retrieval rely on a corpus in which resources are indexed by concepts belonging to a domain ontology. In order to keep such applications up-to-date, new entities need to be frequently ...

Bidirectional Active Learning: A Two-Way Exploration Into Unlabeled and Labeled Data Set.

IEEE transactions on neural networks and learning systems
In practical machine learning applications, human instruction is indispensable for model construction. To utilize the precious labeling effort effectively, active learning queries the user with selective sampling in an interactive way. Traditional ac...

Automated confidence ranked classification of randomized controlled trial articles: an aid to evidence-based medicine.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: For many literature review tasks, including systematic review (SR) and other aspects of evidence-based medicine, it is important to know whether an article describes a randomized controlled trial (RCT). Current manual annotation is not com...