AIMC Topic: Machine Learning

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Parallel Machine Learning for Forecasting the Dynamics of Complex Networks.

Physical review letters
Forecasting the dynamics of large, complex, sparse networks from previous time series data is important in a wide range of contexts. Here we present a machine learning scheme for this task using a parallel architecture that mimics the topology of the...

Precision medicine in stroke: towards personalized outcome predictions using artificial intelligence.

Brain : a journal of neurology
Stroke ranks among the leading causes for morbidity and mortality worldwide. New and continuously improving treatment options such as thrombolysis and thrombectomy have revolutionized acute stroke treatment in recent years. Following modern rhythms, ...

Benchmarking missing-values approaches for predictive models on health databases.

GigaScience
BACKGROUND: As databases grow larger, it becomes harder to fully control their collection, and they frequently come with missing values. These large databases are well suited to train machine learning models, e.g., for forecasting or to extract bioma...

eSPA+: Scalable Entropy-Optimal Machine Learning Classification for Small Data Problems.

Neural computation
Classification problems in the small data regime (with small data statistic T and relatively large feature space dimension D) impose challenges for the common machine learning (ML) and deep learning (DL) tools. The standard learning methods from thes...

Integrating landmark modeling framework and machine learning algorithms for dynamic prediction of tuberculosis treatment outcomes.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: This study aims to establish an informative dynamic prediction model of treatment outcomes using follow-up records of tuberculosis (TB) patients, which can timely detect cases when the current treatment plan may not be effective.

A web-based tool for automatically linking clinical trials to their publications.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Evidence synthesis teams, physicians, policy makers, and patients and their families all have an interest in following the outcomes of clinical trials and would benefit from being able to evaluate both the results posted in trial registrie...

TransformerGO: predicting protein-protein interactions by modelling the attention between sets of gene ontology terms.

Bioinformatics (Oxford, England)
MOTIVATION: Protein-protein interactions (PPIs) play a key role in diverse biological processes but only a small subset of the interactions has been experimentally identified. Additionally, high-throughput experimental techniques that detect PPIs are...

PIPENN: protein interface prediction from sequence with an ensemble of neural nets.

Bioinformatics (Oxford, England)
MOTIVATION: The interactions between proteins and other molecules are essential to many biological and cellular processes. Experimental identification of interface residues is a time-consuming, costly and challenging task, while protein sequence data...

The User Experience of AI.

Med (New York, N.Y.)
The promise of artificial intelligence (AI) and machine learning in healthcare can be realized only when they are smoothly integrated into existing clinical workflows. Doing so requires optimizing the user experience of AI and the data on which these...

Machine learned calibrations to high-throughput molecular excited state calculations.

The Journal of chemical physics
Understanding the excited state properties of molecules provides insight into how they interact with light. These interactions can be exploited to design compounds for photochemical applications, including enhanced spectral conversion of light to inc...