AIMC Topic: Single Molecule Imaging

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Machine learning-powered single-molecule cancer diagnosis using DNA origami tags.

Science advances
Single-molecule detection (SMD) holds considerable promise in biomedical research. Although atomic force microscopy (AFM) provides an important technique with nanoscale resolution for SMD, its broader application is limited by labeling challenges and...

Volumetric localization microscopy with deep learning.

Nature communications
Super-resolution microscopy, particularly localization-based methods, necessitates careful balancing of optical complexity, computational demands, and user accessibility. Conventional strategies typically adopt either deterministic or learning-based ...

Deep learning-assisted analysis of single-particle tracking for automated correlation between diffusion and function.

Nature methods
Subcellular diffusion in living systems reflects cellular processes and interactions. Recent advances in optical microscopy allow the tracking of this nanoscale diffusion of individual objects with unprecedented precision. However, the agnostic and a...

Single Molecule Localization Super-resolution Dataset for Deep Learning with Paired Low-resolution Images.

Scientific data
Deep learning super-resolution microscopy has advanced rapidly in recent years. Super-resolution images acquired by single molecule localization microscopy (SMLM) are ideal sources for high-quality datasets. However, the scarcity of public datasets l...

A review of denoising methods in single-particle cryo-EM.

Micron (Oxford, England : 1993)
Cryo-EM has become a vital technique for resolving macromolecular structures at near-atomic resolution, enabling the visualization of proteins and large molecular complexes. However, the images are often accompanied by extremely low SNR, which poses ...

Deep Learning and Single-Molecule Localization Microscopy Reveal Nanoscopic Dynamics of DNA Entanglement Loci.

ACS nano
Understanding molecular dynamics at the nanoscale remains challenging due to limitations in the temporal resolution of current imaging techniques. Deep learning integrated with Single-Molecule Localization Microscopy (SMLM) offers opportunities to pr...

Pretrained Deep Neural Network Kin-SiM for Single-Molecule FRET Trace Idealization.

The journal of physical chemistry. B
Single-molecule fluorescence resonance energy transfer (smFRET) has emerged as a pivotal technique for probing biomolecular dynamics over time at nanometer scales. Quantitative analyses of smFRET time traces remain challenging due to confounding fact...

Trajectory Analysis in Single-Particle Tracking: From Mean Squared Displacement to Machine Learning Approaches.

International journal of molecular sciences
Single-particle tracking is a powerful technique to investigate the motion of molecules or particles. Here, we review the methods for analyzing the reconstructed trajectories, a fundamental step for deciphering the underlying mechanisms driving the m...

Deep learning-based spectroscopic single-molecule localization microscopy.

Journal of biomedical optics
SIGNIFICANCE: Spectroscopic single-molecule localization microscopy (sSMLM) takes advantage of nanoscopy and spectroscopy, enabling sub-10 nm resolution as well as simultaneous multicolor imaging of multi-labeled samples. Reconstruction of raw sSMLM ...

Deep Learning-Assisted Automated Multidimensional Single Particle Tracking in Living Cells.

Nano letters
The translational and rotational dynamics of anisotropic optical nanoprobes revealed in single particle tracking (SPT) experiments offer molecular-level information about cellular activities. Here, we report an automated high-speed multidimensional S...