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COS Cells

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Analyzing complex single-molecule emission patterns with deep learning.

Nature methods
A fluorescent emitter simultaneously transmits its identity, location, and cellular context through its emission pattern. We developed smNet, a deep neural network for multiplexed single-molecule analysis to retrieve such information with high accura...

Deep learning enables fast and dense single-molecule localization with high accuracy.

Nature methods
Single-molecule localization microscopy (SMLM) has had remarkable success in imaging cellular structures with nanometer resolution, but standard analysis algorithms require sparse emitters, which limits imaging speed and labeling density. Here, we ov...

Label-free multiplexed microtomography of endogenous subcellular dynamics using generalizable deep learning.

Nature cell biology
Simultaneous imaging of various facets of intact biological systems across multiple spatiotemporal scales is a long-standing goal in biology and medicine, for which progress is hindered by limits of conventional imaging modalities. Here we propose us...

Deep learning-based spectroscopic single-molecule localization microscopy.

Journal of biomedical optics
SIGNIFICANCE: Spectroscopic single-molecule localization microscopy (sSMLM) takes advantage of nanoscopy and spectroscopy, enabling sub-10 nm resolution as well as simultaneous multicolor imaging of multi-labeled samples. Reconstruction of raw sSMLM ...