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Open data and algorithms for open science in AI-driven molecular informatics.

Current opinion in structural biology
Recent years have seen a sharp increase in the development of deep learning and artificial intelligence-based molecular informatics. There has been a growing interest in applying deep learning to several subfields, including the digital transformatio...

The Use of Facial Recognition Software and Published Manuscripts to Examine Trends in Surgical Editorial Board Diversity.

The Journal of surgical research
INTRODUCTION: Recent social justice movements have highlighted the need for improved diversity and inclusion. These movements have emphasized the need for inclusivity of all genders and races in all sectors including surgical editorial boards. There ...

Diagnostic Accuracy of Differential-Diagnosis Lists Generated by Generative Pretrained Transformer 3 Chatbot for Clinical Vignettes with Common Chief Complaints: A Pilot Study.

International journal of environmental research and public health
The diagnostic accuracy of differential diagnoses generated by artificial intelligence (AI) chatbots, including the generative pretrained transformer 3 (GPT-3) chatbot (ChatGPT-3) is unknown. This study evaluated the accuracy of differential-diagnosi...

A fair experimental comparison of neural network architectures for latent representations of multi-omics for drug response prediction.

BMC bioinformatics
BACKGROUND: Recent years have seen a surge of novel neural network architectures for the integration of multi-omics data for prediction. Most of the architectures include either encoders alone or encoders and decoders, i.e., autoencoders of various s...

PyMIC: A deep learning toolkit for annotation-efficient medical image segmentation.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: Open-source deep learning toolkits are one of the driving forces for developing medical image segmentation models that are essential for computer-assisted diagnosis and treatment procedures. Existing toolkits mainly focus on...

Implicit Perception of Differences between NLP-Produced and Human-Produced Language in the Mentalizing Network.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)
Natural language processing (NLP) is central to the communication with machines and among ourselves, and NLP research field has long sought to produce human-quality language. Identification of informative criteria for measuring NLP-produced language ...

Strategy for automatic ultrasound (US) probe positioning in robot-assisted ultrasound guided radiation therapy.

Physics in medicine and biology
. As part of image-guided radiotherapy, ultrasound-guided radiotherapy is currently already in use and under investigation for robot assisted systems Ipsen 2021. It promises a real-time tumor localization during irradiation (intrafractional) without ...

Fostering discoveries in the era of exascale computing: How the next generation of supercomputers empowers computational and experimental biophysics alike.

Biophysical journal
Over a century ago, physicists started broadly relying on theoretical models to guide new experiments. Soon thereafter, chemists began doing the same. Now, biological research enters a new era when experiment and theory walk hand in hand. Novel softw...

Ultra-low-dose CT lung screening with artificial intelligence iterative reconstruction: evaluation via automatic nodule-detection software.

Clinical radiology
AIM: To test the feasibility of ultra-low-dose (ULD) computed tomography (CT) combined with an artificial intelligence iterative reconstruction (AIIR) algorithm for screening pulmonary nodules using computer-assisted diagnosis (CAD).

General Graph Neural Network-Based Model To Accurately Predict Cocrystal Density and Insight from Data Quality and Feature Representation.

Journal of chemical information and modeling
Cocrystal engineering as an effective way to modify solid-state properties has inspired great interest from diverse material fields while cocrystal density is an important property closely correlated with the material function. In order to accurately...