AIMC Topic: Zebrafish

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Deep learning to overcome Zernike phase-contrast nanoCT artifacts for automated micro-nano porosity segmentation in bone.

Journal of synchrotron radiation Jan 1, 2024
Bone material contains a hierarchical network of micro- and nano-cavities and channels, known as the lacuna-canalicular network (LCN), that is thought to play an important role in mechanobiology and turnover. The LCN comprises micrometer-sized lacuna...
Animals Deep Learning Humans Zebrafish Artifacts Image Processing, Computer-Assisted Bone and Bones Porosity
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Pepsin Hydrolysate from Surimi Industry-Related Olive Flounder Head Byproducts Attenuates LPS-Induced Inflammation and Oxidative Stress in RAW 264.7 Macrophages and In Vivo Zebrafish Model.

Marine drugs Dec 28, 2023
Fish head byproducts derived from surimi processing contribute about 15% of the total body weight, which are beneficial to health because they contain essential nutrients. In this study, olive flounder (OF) was the target species in order to maximize...
Perciformes Flounder Pepsin A Lipopolysaccharides Macrophages Zebrafish Oxidative Stress Inflammation Animals
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Design and build of small-scale magnetic soft-bodied robots with multimodal locomotion.

Nature protocols Dec 14, 2023
Small-scale magnetic soft-bodied robots can be designed to operate based on different locomotion modes to navigate and function inside unstructured, confined and varying environments. These soft millirobots may be useful for medical applications wher...
Robotics Magnetic Phenomena Zebrafish Humans Animals Swimming Locomotion
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Model-based deep learning framework for accelerated optical projection tomography.

Scientific reports Dec 8, 2023
In this work, we propose a model-based deep learning reconstruction algorithm for optical projection tomography (ToMoDL), to greatly reduce acquisition and reconstruction times. The proposed method iterates over a data consistency step and an image d...
Animals Tomography Neural Networks, Computer Zebrafish Image Processing, Computer-Assisted Algorithms Phantoms, Imaging Deep Learning
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Automated staging of zebrafish embryos with deep learning.

Life science alliance Oct 26, 2023
The zebrafish () is an important biomedical model organism used in many disciplines. The phenomenon of developmental delay in zebrafish embryos has been widely reported as part of a mutant or treatment-induced phenotype. However, the detection and qu...
Phenotype Animals Zebrafish Deep Learning
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Rapid automated 3-D pose estimation of larval zebrafish using a physical model-trained neural network.

PLoS computational biology Oct 23, 2023
Quantitative ethology requires an accurate estimation of an organism's postural dynamics in three dimensions plus time. Technological progress over the last decade has made animal pose estimation in challenging scenarios possible with unprecedented d...
Larva Imaging, Three-Dimensional Swimming Zebrafish Neural Networks, Computer Animals Humans
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On the structure function dichotomy: A perspective from human brain network modeling. Comment on "Structure and function in artificial, zebrafish and human neural networks" by Peng Ji et al.

Physics of life reviews Oct 18, 2023
Zebrafish Head Brain Animals Humans Neural Networks, Computer
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Complexity in structural and functional brain networks. Comment on "Structure and function in artificial, zebrafish and human neural networks" by Ji et al.

Physics of life reviews Oct 11, 2023
Zebrafish Head Brain Animals Humans Neural Networks, Computer
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Decoding brain complexity: Structural-functional interplay in neural networks: Comment on "Structure and function in artificial, zebrafish and human neural networks" by Peng Ji et al.

Physics of life reviews Sep 14, 2023
Neural Networks, Computer Brain Humans Animals Zebrafish
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Use of Deep-Learning Assisted Assessment of Cardiac Parameters in Zebrafish to Discover Cyanidin Chloride as a Novel Keap1 Inhibitor Against Doxorubicin-Induced Cardiotoxicity.

Advanced science (Weinheim, Baden-Wurttemberg, Germany) Sep 7, 2023
Doxorubicin-induced cardiomyopathy (DIC) brings tough clinical challenges as well as continued demand in developing agents for adjuvant cardioprotective therapies. Here, a zebrafish phenotypic screening with deep-learning assisted multiplex cardiac f...
Zebrafish Artificial Intelligence NF-E2-Related Factor 2 Doxorubicin Deep Learning Animals Cardiotoxicity Molecular Docking Simulation Kelch-Like ECH-Associated Protein 1 Oxidative Stress
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