AIMC Topic: Computer Simulation

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A comparative study of MLP and LSTM neural networks for shale gas production prediction based on numerical simulation data.

PloS one
Accurate prediction of shale gas production is essential for optimizing reservoir development and improving production efficiency. In this study, a numerical simulation model was first developed to systematically calculate daily shale gas production ...

Assessing Data Quality in Heterogeneous Health Care Integration: Simulation Study of the AIDAVA Framework.

JMIR medical informatics
BACKGROUND: Integrated health data are foundational for secondary use, research, and policymaking. However, data quality issues-such as missing values and inconsistencies-are common due to the heterogeneity of health data sources. Existing frameworks...

An LLM-Based Tool for Automated Generation of 3D Model Organism Colony Simulations.

ACS synthetic biology
We present MicroVerse, a software application based on large language models (LLMs) designed to generate C# scripts simulating three-dimensional colonies of model organisms, including and , within the Unity platform. The system, which utilizes fine-...

Carafe enables high quality in silico spectral library generation for data-independent acquisition proteomics.

Nature communications
Data-independent acquisition (DIA)-based mass spectrometry is becoming an increasingly popular mass spectrometry acquisition strategy for carrying out quantitative proteomics experiments. Most of the popular DIA search engines make use of in silico g...

Machine learning analysis and simulation of pharmaceutical drying process based on prediction of concentration distribution and mass transfer.

Scientific reports
Modeling and analysis of the lyophilization process for low-temperature drying of pharmaceutical compounds was evaluated via a hybrid model that combines mass transfer and machine learning. We investigated the predictive accuracy of three machine lea...

Discovering sensorimotor agency in cellular automata using diversity search.

Science advances
The field of artificial life studies how life-like phenomena such as agency and self-regulation can self-organize in computer simulations. In cellular automata (CA), a key open question is whether it is possible to find environment rules that self-or...

Design and optimization of soft finger actuators for rehabilitation applications: A combined finite element and neural network approach.

PloS one
This study presents a comprehensive analysis of soft finger actuators using finite element modeling to assess their performance in various structural configurations. By conducting detailed numerical simulations, we explore how variations in structura...

Robust adaptive control with lumped model uncertainty and wind disturbance estimation for airship trajectory tracking.

PloS one
The robotic airship can be used as an aerostatic platform for many potential applications, for example, communication, hovering payload deliveries, data-gathering for research studies, etc. These applications require a fully autonomous perspective of...

Prediction of peptide cleavage sites using protein language models and graph neural networks.

Scientific reports
The growing interest in using peptide molecules as therapeutic agents, driven by their high selectivity and efficacy, has become a significant trend in the pharmaceutical industry. However, their oral administration remains challenging due to their l...

In-silico comparison of a diffusion model with conventionally trained deep networks for translating 64mT to 3T brain FLAIR.

Scientific reports
Deep learning (DL) methods are increasingly applied to address the low signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) of low-field MRI (LFMRI). This study evaluates the potential of diffusion models for LFMRI enhancement, comparing the...