AIMC Topic: Deep Learning

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Memory efficient model based deep learning reconstructions for high spatial resolution 3D non-cartesian acquisitions.

Physics in medicine and biology
. Model based deep learning (MBDL) has been challenging to apply to the reconstruction of 3D non-Cartesian MRI due to GPU memory demand because the entire volume is needed for data-consistency steps embedded in the model. This requirement makes holdi...

A systematic evaluation of deep learning methods for the prediction of drug synergy in cancer.

PLoS computational biology
One of the main obstacles to the successful treatment of cancer is the phenomenon of drug resistance. A common strategy to overcome resistance is the use of combination therapies. However, the space of possibilities is huge and efficient search strat...

Domain-guided data augmentation for deep learning on medical imaging.

PloS one
While domain-specific data augmentation can be useful in training neural networks for medical imaging tasks, such techniques have not been widely used to date. Our objective was to test whether domain-specific data augmentation is useful for medical ...

A Characterization of Deep Learning Reconstruction Applied to Dual-Energy Computed Tomography Monochromatic and Material Basis Images.

Journal of computer assisted tomography
OBJECTIVE: Advancements in computed tomography (CT) reconstruction have enabled image quality improvements and dose reductions. Previous advancements have included iterative and model-based reconstruction. The latest image reconstruction advancement ...

Using a New Deep Learning Method for 3D Cephalometry in Patients With Cleft Lip and Palate.

The Journal of craniofacial surgery
Deep learning algorithms based on automatic 3-dimensional (D) cephalometric marking points about people without craniomaxillofacial deformities has achieved good results. However, there has been no previous report about cleft lip and palate. The purp...

Applications of deep learning to reduce the need for iodinated contrast media for CT imaging: a systematic review.

International journal of computer assisted radiology and surgery
PURPOSE: The usage of iodinated contrast media (ICM) can improve the sensitivity and specificity of computed tomography (CT) for many clinical indications. However, the adverse effects of ICM administration can include renal injury, life-threatening ...

Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy.

Surgical endoscopy
OBJECTIVE: To develop a deep learning algorithm for anatomy recognition in thoracoscopic video frames from robot-assisted minimally invasive esophagectomy (RAMIE) procedures using deep learning.

Dual center validation of deep learning for automated multi-label segmentation of thoracic anatomy in bedside chest radiographs.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVES: Bedside chest radiographs (CXRs) are challenging to interpret but important for monitoring cardiothoracic disease and invasive therapy devices in critical care and emergency medicine. Taking surrounding anatomy into account...

Generalizable biomarker prediction from cancer pathology slides with self-supervised deep learning: A retrospective multi-centric study.

Cell reports. Medicine
Deep learning (DL) can predict microsatellite instability (MSI) from routine histopathology slides of colorectal cancer (CRC). However, it is unclear whether DL can also predict other biomarkers with high performance and whether DL predictions genera...

CT-based deep learning model for the prediction of DNA mismatch repair deficient colorectal cancer: a diagnostic study.

Journal of translational medicine
BACKGROUND: Stratification of DNA mismatch repair (MMR) status in patients with colorectal cancer (CRC) enables individual clinical treatment decision making. The present study aimed to develop and validate a deep learning (DL) model based on the pre...