AIMC Topic: Deep Learning

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Empowering COVID-19 detection: Optimizing performance through fine-tuned EfficientNet deep learning architecture.

Computers in biology and medicine
The worldwide COVID-19 pandemic has profoundly influenced the health and everyday experiences of individuals across the planet. It is a highly contagious respiratory disease requiring early and accurate detection to curb its rapid transmission. Initi...

Surface sediment classification using a deep learning model and unmanned aerial vehicle data of tidal flats.

Marine pollution bulletin
This study proposes a deep learning model, U-Net, to improve surface sediment classification using high-resolution unmanned aerial vehicle (UAV) images. We constructed training datasets with UAV images and corresponding labeling data acquired from th...

In silico evolution of autoinhibitory domains for a PD-L1 antagonist using deep learning models.

Proceedings of the National Academy of Sciences of the United States of America
There has been considerable progress in the development of computational methods for designing protein-protein interactions, but engineering high-affinity binders without extensive screening and maturation remains challenging. Here, we test a protein...

Personal transcriptome variation is poorly explained by current genomic deep learning models.

Nature genetics
Genomic deep learning models can predict genome-wide epigenetic features and gene expression levels directly from DNA sequence. While current models perform well at predicting gene expression levels across genes in different cell types from the refer...

Subspace Model-Assisted Deep Learning for Improved Image Reconstruction.

IEEE transactions on medical imaging
Image reconstruction from limited and/or sparse data is known to be an ill-posed problem and a priori information/constraints have played an important role in solving the problem. Early constrained image reconstruction methods utilize image priors ba...

Continual Nuclei Segmentation via Prototype-Wise Relation Distillation and Contrastive Learning.

IEEE transactions on medical imaging
Deep learning models have achieved remarkable success in multi-type nuclei segmentation. These models are mostly trained at once with the full annotation of all types of nuclei available, while lack the ability of continually learning new classes due...

Blackberry Fruit Classification in Underexposed Images Combining Deep Learning and Image Fusion Methods.

Sensors (Basel, Switzerland)
Berry production is increasing worldwide each year; however, high production leads to labor shortages and an increase in wasted fruit during harvest seasons. This problem opened new research opportunities in computer vision as one main challenge to a...

Dual-Stream Spatiotemporal Networks with Feature Sharing for Monitoring Animals in the Home Cage.

Sensors (Basel, Switzerland)
This paper presents a spatiotemporal deep learning approach for mouse behavioral classification in the home-cage. Using a series of dual-stream architectures with assorted modifications for optimal performance, we introduce a novel approach that joi...

FastCellpose: A Fast and Accurate Deep-Learning Framework for Segmentation of All Glomeruli in Mouse Whole-Kidney Microscopic Optical Images.

Cells
Automated evaluation of all glomeruli throughout the whole kidney is essential for the comprehensive study of kidney function as well as understanding the mechanisms of kidney disease and development. The emerging large-volume microscopic optical ima...

A deep learning model predicts the presence of diverse cancer types using circulating tumor cells.

Scientific reports
Circulating tumor cells (CTCs) are cancer cells that detach from the primary tumor and intravasate into the bloodstream. Thus, non-invasive liquid biopsies are being used to analyze CTC-expressed genes to identify potential cancer biomarkers. In this...