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Genomics

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Cytogenetics and genomics in pediatric acute lymphoblastic leukaemia.

Best practice & research. Clinical haematology
The last five decades have witnessed significant improvement in diagnostics, treatment and management of children with acute lymphoblastic leukaemia (ALL). These advancements have become possible through progress in our understanding of the genetic a...

Advancing AI in healthcare: A comprehensive review of best practices.

Clinica chimica acta; international journal of clinical chemistry
Artificial Intelligence (AI) and Machine Learning (ML) are powerful tools shaping the healthcare sector. This review considers twelve key aspects of AI in clinical practice: 1) Ethical AI; 2) Explainable AI; 3) Health Equity and Bias in AI; 4) Sponso...

The seductive allure of spatial biology: accelerating new discoveries in the life sciences.

Immunology and cell biology
Spatial biology is a rapidly developing field which enables the visualization of protein and transcriptomic data while preserving tissue context and architecture. Initially used in discovery, there is growing promise for translational and diagnostic ...

A Review on the Recent Applications of Deep Learning in Predictive Drug Toxicological Studies.

Chemical research in toxicology
Drug toxicity prediction is an important step in ensuring patient safety during drug design studies. While traditional preclinical studies have historically relied on animal models to evaluate toxicity, recent advances in deep-learning approaches hav...

Genomics and Artificial Intelligence: Prostate Cancer.

The Urologic clinics of North America
Artificial intelligence (AI) is revolutionizing prostate cancer genomics research. By leveraging machine learning and deep learning algorithms, researchers can rapidly analyze vast genomic datasets to identify patterns and correlations that may be mi...

deepGBLUP: joint deep learning networks and GBLUP framework for accurate genomic prediction of complex traits in Korean native cattle.

Genetics, selection, evolution : GSE
BACKGROUND: Genomic prediction has become widespread as a valuable tool to estimate genetic merit in animal and plant breeding. Here we develop a novel genomic prediction algorithm, called deepGBLUP, which integrates deep learning networks and a geno...

Applications of artificial intelligence in clinical laboratory genomics.

American journal of medical genetics. Part C, Seminars in medical genetics
The transition from analog to digital technologies in clinical laboratory genomics is ushering in an era of "big data" in ways that will exceed human capacity to rapidly and reproducibly analyze those data using conventional approaches. Accurately ev...

Integrative deep learning analysis improves colon adenocarcinoma patient stratification at risk for mortality.

EBioMedicine
BACKGROUND: Colorectal cancers are the fourth most diagnosed cancer and the second leading cancer in number of deaths. Many clinical variables, pathological features, and genomic signatures are associated with patient risk, but reliable patient strat...

A performance evaluation of drug response prediction models for individual drugs.

Scientific reports
Drug response prediction is important to establish personalized medicine for cancer therapy. Model construction for predicting drug response (i.e., cell viability half-maximal inhibitory concentration [IC]) of an individual drug by inputting pharmaco...

The prediction of drug sensitivity by multi-omics fusion reveals the heterogeneity of drug response in pan-cancer.

Computers in biology and medicine
Cancer drug response prediction based on genomic information plays a crucial role in modern pharmacogenomics, enabling individualized therapy. Given the expensive and complexity of biological experiments, computational methods serve as effective tool...