International journal of data mining and bioinformatics
Jan 1, 2015
Real-Time Quantitative Polymerase Chain Reaction (qRT-PCR) is widely used in biological research. It is a key to the availability of qRT-PCR experiment to select a stable reference gene. However, selecting an appropriate reference gene usually requir...
IEEE/ACM transactions on computational biology and bioinformatics
Jan 1, 2015
We introduce RLIMS-P version 2.0, an enhanced rule-based information extraction (IE) system for mining kinase, substrate, and phosphorylation site information from scientific literature. Consisting of natural language processing and IE modules, the s...
Studies in health technology and informatics
Jan 1, 2015
We aim to ease the process of authoring accessible graphics as well as taking a first step towards the long-term goal of allowing blind persons to access graphics autonomously. We are developing and experimenting with a hierarchical set of knowledge ...
Studies in health technology and informatics
Jan 1, 2015
In this paper, we introduce a set of methodological steps for knowledge acquisition applied to the organization of biomedical information through ontologies. Those steps are tested in a real case involving Human T Cell Lymphotropic Virus (HTLV), whic...
Studies in health technology and informatics
Jan 1, 2015
This study's objective is to develop and use a scalable genuine technology platform for clinical decision support based on Arden Syntax, which was extended by fuzzy set theory and fuzzy logic. Arden Syntax is a widely recognized formal language for r...
Studies in health technology and informatics
Jan 1, 2015
Computerisation of quality indicators for the English National Health Service currently relies primarily on queries and clinical coding, with little use of ontologies. We created a searchable ontology for a diverse set of healthcare quality indicator...
Studies in health technology and informatics
Jan 1, 2015
Different groups of audiences in health care: health professionals and health consumers, each have different information needs. Health monographs targeting different audiences are created by leveraging readers' background knowledge. The NCI's Physici...
Studies in health technology and informatics
Jan 1, 2015
This article describes the process of building an ontology to assist medical students and professionals specialized in Oncology. The ontology allows the user to obtain knowledge more quickly and thus assist professionals in their decision-making.
Studies in health technology and informatics
Jan 1, 2015
A relational database model is presented that stores the hierarchical linkages between clinical events with qualifier codes, such that the explicit contextual meaning of an event's attributes is preserved upon retrieval. A retrospective analysis of 3...
Studies in health technology and informatics
Jan 1, 2015
Depression in adolescence is associated with significant suicidality. Therefore, it is important to detect the risk for depression and provide timely care to adolescents. This study aims to develop an ontology for collecting and analyzing social medi...
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