AIMC Topic: Software

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The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource.

Nucleic acids research
The NHGRI-EBI GWAS Catalog (www.ebi.ac.uk/gwas) is a FAIR knowledgebase providing detailed, structured, standardised and interoperable genome-wide association study (GWAS) data to >200 000 users per year from academic research, healthcare and industr...

CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database.

Nucleic acids research
The Comprehensive Antibiotic Resistance Database (CARD; card.mcmaster.ca) combines the Antibiotic Resistance Ontology (ARO) with curated AMR gene (ARG) sequences and resistance-conferring mutations to provide an informatics framework for annotation a...

ASAS-NANP symposium: mathematical modeling in animal nutrition-Making sense of big data and machine learning: how open-source code can advance training of animal scientists.

Journal of animal science
Advancements in precision livestock technology have resulted in an unprecedented amount of data being collected on individual animals. Throughout the data analysis chain, many bottlenecks occur, including processing raw sensor data, integrating multi...

Vitreoretinal Surgical Instrument Tracking in Three Dimensions Using Deep Learning.

Translational vision science & technology
PURPOSE: To evaluate the potential for artificial intelligence-based video analysis to determine surgical instrument characteristics when moving in the three-dimensional vitreous space.

Development of a Web Application based on Machine Learning for screening esophageal varices in cirrhosis.

La Tunisie medicale
INTRODUCTION: Esophageal varices (EV) are a common manifestation of portal hypertension in cirrhotic patients. Upper gastrointestinal endoscopy (UGE) is the gold standard for diagnosing EV. However, it is an invasive examination with a relatively hig...

Traditional and deep learning-oriented medical and biological image analysis.

Bratislavske lekarske listy
We investigated various methods for image segmentation and image processing for the segmentation of MRI of human medical data, as well as bioinformatics for the segmentation of brain cell details, in this work. The goal is to demonstrate and bring va...

Machine learning-based natural language processing to extract PD-L1 expression levels from clinical notes.

Health informatics journal
PD-L1 expression is used to determine oncology patients' response to and eligibility for immunologic treatments; however, PD-L1 expression status often only exists in unstructured clinical notes, limiting ability to use it in population-level studie...

Ensuring AI Is Helpful and Not Harmful in Health Care.

IEEE pulse
The presence of artificial intelligence (AI) is spreading fast through almost every industry, and health care is no exception. Data-based decision-making software is becoming pervasive in all facets of modern life, and the AI-enabled chatbot ChatGPT ...

CTCNet: A CNN-Transformer Cooperation Network for Face Image Super-Resolution.

IEEE transactions on image processing : a publication of the IEEE Signal Processing Society
Recently, deep convolution neural networks (CNNs) steered face super-resolution methods have achieved great progress in restoring degraded facial details by joint training with facial priors. However, these methods have some obvious limitations. On t...

[Method to Generate Complex Predictive Features for Machine Learning-Based Prediction of the Local Structure and Functions of Proteins].

Molekuliarnaia biologiia
Recently, prediction of the structure and function of a protein from its sequence underwent a rapid increase in performance. It is primarily due to the application of machine learning methods, many of which rely on the predictive features supplied to...