AIMC Topic: Algorithms

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ReQuant: improved base modification calling by k-mer value imputation.

Nucleic acids research
Nanopore sequencing allows identification of base modifications, such as methylation, directly from raw current data. Prevailing approaches, including deep learning (DL) methods, require training data covering all possible sequence contexts. These da...

Compressed chromatographic fingerprint of Artemisiae argyi Folium empowered by 1D-CNN: Reduce mobile phase consumption using chemometric algorithm.

Journal of chromatography. A
INTRODUCTION: High-Performance Liquid Chromatography (HPLC) is widely used for its high sensitivity, stability, and accuracy. Nonetheless, it often involves lengthy analysis times and considerable solvent consumption, especially when dealing with com...

Reinforcement learning for automated method development in liquid chromatography: insights in the reward scheme and experimental budget selection.

Journal of chromatography. A
Chromatographic problem solving, commonly referred to as method development (MD), is hugely complex, given the many operational parameters that must be optimized and their large effect on the elution times of individual sample compounds. Recently, th...

Application of physics-informed neural networks to predict concentration profiles in gradient liquid chromatography.

Journal of chromatography. A
Chromatography is one of the key methods in the analysis of mixture compositions, in the testing of chemical purity, as well as in the production of highly pure compounds. For this reason, it finds an important place in many industries. Currently, on...

Thirty-day mortality risk prediction for geriatric patients undergoing non-cardiac surgery in the surgical intensive care unit.

European journal of medical research
BACKGROUND: The prediction of mortality for elderly patients undergoing non-cardiac surgeries is a vital research area, as accurate risk assessment can help surgeons make better clinical decisions during the perioperative period. This study aims to b...

Exploring machine learning algorithms to predict short birth intervals and identify its determinants among reproductive-age women in East Africa.

BMC pregnancy and childbirth
BACKGROUND: The occurrence of short birth intervals among reproductive-age women in East Africa is a critical public health issue, contributing to maternal and child health risks. Identifying the key factors that predict short birth intervals can hel...

PCVR: a pre-trained contextualized visual representation for DNA sequence classification.

BMC bioinformatics
BACKGROUND: The classification of DNA sequences is pivotal in bioinformatics, essentially for genetic information analysis. Traditional alignment-based tools tend to have slow speed and low recall. Machine learning methods learn implicit patterns fro...

Feature-based behavior coding for efficient exploratory analysis using pose estimation.

Behavior research methods
This paper introduces feature-based behavior coding (FBBC), an efficient method for exploratory analysis in behavioral research using pose estimation techniques. FBBC addresses the challenges of traditional behavioral coding methods, particularly in ...

Construction of disability risk prediction model for the elderly based on machine learning.

Scientific reports
The study aimed to develop a predictive model using machine learning algorithms, providing healthcare professionals with a novel tool for assessing disability risk in older adults. Data from the 2018 and 2020 waves of the China Health and Retirement ...

Addressing significant challenges for animal detection in camera trap images: a novel deep learning-based approach.

Scientific reports
Wildlife biologists increasingly use camera traps for monitoring animal populations. However, manually sifting through the collected images is expensive and time-consuming. Current deep learning studies for camera trap images do not adequately tackle...