AIMC Topic: Bacterial Proteins

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Accurate prediction of protein-protein interactions by integrating potential evolutionary information embedded in PSSM profile and discriminative vector machine classifier.

Oncotarget Apr 4, 2017
Identification of protein-protein interactions (PPIs) is of critical importance for deciphering the underlying mechanisms of almost all biological processes of cell and providing great insight into the study of human disease. Although much effort has...
Protein Binding Computational Biology Support Vector Machine Algorithms Reproducibility of Results Saccharomyces cerevisiae Protein Interaction Mapping Saccharomyces cerevisiae Proteins Databases, Protein Bacterial Proteins Helicobacter pylori Humans
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Machine learning-, rule- and pharmacophore-based classification on the inhibition of P-glycoprotein and NorA.

SAR and QSAR in environmental research Sep 1, 2016
The efflux pumps P-glycoprotein (P-gp) in humans and NorA in Staphylococcus aureus are of great interest for medicinal chemists because of their important roles in multidrug resistance (MDR). The high polyspecificity as well as the unavailability of ...
Humans ATP Binding Cassette Transporter, Subfamily B, Member 1 Ligands Databases, Chemical Quantitative Structure-Activity Relationship Multidrug Resistance-Associated Proteins Drug Discovery Machine Learning Staphylococcus aureus Algorithms Bacterial Proteins
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Molecular Evaluation of High Fluoroquinolone Resistant Genes in Endemic Cases of Shigellosis, Northeast Part of Karnataka, India.

Annals of global health Jan 1, 2016
OBJECTIVES: Shigellosis is an acute infection of the intestine caused by bacteria in the genus Shigella and also an important cause of diarrhea in developing countries. This study was carried out to find the extent and nature of the emerging resistan...
India Drug Resistance, Bacterial Endemic Diseases Microbial Sensitivity Tests Bacterial Proteins Fluoroquinolones Humans Shigella Feces Anti-Bacterial Agents Dysentery, Bacillary
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[Characterization of β-1, 4-mannanase from Bacillus pumilus and heterologous expression in Lactobacillus casei].

Wei sheng wu xue bao = Acta microbiologica Sinica Dec 4, 2015
OBJECTIVE: Lactobacillus casei is widely used in food production and feed industry. The aim of this study was to construct the recombinant expression mannanase Lb. casei.
Bacterial Proteins Kinetics Cloning, Molecular Gene Expression beta-Mannosidase Enzyme Stability Bacillus Lacticaseibacillus casei
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[Cloning, expression, and purification of c-di-AMP metabolism-related genes from Porphyromonas gingivalis].

Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology Dec 1, 2015
OBJECTIVE: To clone, express, and purify cyclic diadenosine monophosphate (c-di-AMP) metabolism-related genes from Porphyromonas gingivalis (P. gingivalis) ATCC33277.
Dinucleoside Phosphates Genetic Vectors Recombinant Proteins Cloning, Molecular Escherichia coli Porphyromonas gingivalis Plasmids Bacterial Proteins Polymerase Chain Reaction
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Crystallization and X-ray diffraction of an ectoine hydroxylase from Bacillus pseudofirmus OF4.

Wei sheng wu xue bao = Acta microbiologica Sinica Nov 4, 2015
OBJECTIVE: To study crystallization and X-Ray diffraction of ectoine hydroxylase from Bacillus pseudofirmus OF4.
Bacterial Proteins Amino Acid Sequence Crystallization Sequence Alignment Molecular Sequence Data Bacillus Amino Acids, Diamino X-Ray Diffraction Mixed Function Oxygenases
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[Alkaline-adapted beta-mannanase of Bacillus pumilus: gene heterologous expression and enzyme characterization].

Wei sheng wu xue bao = Acta microbiologica Sinica Nov 4, 2015
OBJECTIVE: We expressed a novel alkaline-adapted beta-mannanase gene and characterized the enzyme for potential industrial applications.
Molecular Sequence Data beta-Mannosidase Sequence Alignment Alkalies Enzyme Stability Base Sequence Bacillus Amino Acid Sequence Cloning, Molecular Phylogeny Escherichia coli Gene Expression Bacterial Proteins Kinetics
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Meta-learning framework applied in bioinformatics inference system design.

International journal of data mining and bioinformatics Jan 1, 2015
This paper describes a meta-learner inference system development framework which is applied and tested in the implementation of bioinformatic inference systems. These inference systems are used for the systematic classification of the best candidates...
Bacteria Signal Transduction Metabolome Algorithms Computer Simulation Pattern Recognition, Automated Sequence Analysis, Protein Meta-Analysis as Topic Bacterial Proteins Models, Biological Artificial Intelligence
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