AIMC Topic: Data Mining

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Exploring sensory alterations and repetitive behaviors in children with autism spectrum disorder from the perspective of artificial neural networks.

Research in developmental disabilities
BACKGROUND: Restrictive repetitive behaviors (RRBs) and sensory processing disorders are core symptoms of autism spectrum disorder (ASD). Their relationship is reported, but existing data are conflicting as to whether they are related but distinct, o...

Advancing pharmacogenomics research: automated extraction of insights from PubMed using SpaCy NLP framework.

Pharmacogenomics
This paper presents a methodology for automatically extracting insights from PubMed articles using a Natural Language Processing (NLP) framework. Our approach, leveraging advanced NLP techniques and Named Entity Recognition (NER), is crucial for adva...

Machine learning approaches for the discovery of clinical pathways from patient data: A systematic review.

Journal of biomedical informatics
BACKGROUND: Clinical pathways are sequences of events followed during the clinical care of a group of patients who meet pre-defined criteria. They have many applications ranging from healthcare evaluation and optimization to clinical decision support...

MultiADE: A Multi-domain benchmark for Adverse Drug Event extraction.

Journal of biomedical informatics
OBJECTIVE: Active adverse event surveillance monitors Adverse Drug Events (ADE) from different data sources, such as electronic health records, medical literature, social media and search engine logs. Over the years, many datasets have been created, ...

Public opinion mining in social media about Ethiopian broadcasts using deep learning.

Scientific reports
Now adays people express and share their opinions on various events on the internet thanks to social media. Opinion mining is the process of interpreting user-generated opinion data on social media. Aside from its lack of resources in opinion-mining ...

Protein-Protein Interaction Networks Derived from Classical and Machine Learning-Based Natural Language Processing Tools.

Journal of proteome research
The study of protein-protein interactions (PPIs) provides insight into various biological mechanisms, including the binding of antibodies to antigens, enzymes to inhibitors or promoters, and receptors to ligands. Recent studies of PPIs have led to si...

KnowVID-19: A Knowledge-Based System to Extract Targeted COVID-19 Information from Online Medical Repositories.

Biomolecules
We present KnowVID-19, a knowledge-based system that assists medical researchers and scientists in extracting targeted information quickly and efficiently from online medical literature repositories, such as PubMed, PubMed Central, and other biomedic...

Medical Information Extraction With NLP-Powered QABots: A Real-World Scenario.

IEEE journal of biomedical and health informatics
The advent of computerized medical recording systems in healthcare facilities has made data retrieval tasks easier, compared to manual recording. Nevertheless, the potential of the information contained within medical records remains largely untapped...

SFWN: A Novel Semi-Supervised Feature Weighted Neural Network for Gene Data Feature Learning and Mining With Graph Modeling.

IEEE journal of biomedical and health informatics
Gene expression data can serve for analyzing the genes with changed expressions, the correlation between genes and the influence of different circumstance on gene activities. However, labeling a large number of gene expression data is laborious and t...

Semantic-guided attention and adaptive gating for document-level relation extraction.

Scientific reports
In natural language processing, document-level relation extraction is a complex task that aims to predict the relationships among entities by capturing contextual interactions from an unstructured document. Existing graph- and transformer-based model...