AIMC Topic: Databases, Bibliographic

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Collating the knowledge base for core outcome set development: developing and appraising the search strategy for a systematic review.

BMC medical research methodology
BACKGROUND: The COMET (Core Outcome Measures in Effectiveness Trials) Initiative is developing a publicly accessible online resource to collate the knowledge base for core outcome set development (COS) and the applied work from different health condi...

How Well Do AI-Enabled Decision Support Systems Perform in Clinical Settings?

Studies in health technology and informatics
Real-world performance of machine learning (ML) models is crucial for safely and effectively embedding them into clinical decision support (CDS) systems. We examined evidence about the performance of contemporary ML-based CDS in clinical settings. A ...

A new approach and gold standard toward author disambiguation in MEDLINE.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Author-centric analyses of fast-growing biomedical reference databases are challenging due to author ambiguity. This problem has been mainly addressed through author disambiguation using supervised machine-learning algorithms. Such algorit...

Natural language processing of symptoms documented in free-text narratives of electronic health records: a systematic review.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Natural language processing (NLP) of symptoms from electronic health records (EHRs) could contribute to the advancement of symptom science. We aim to synthesize the literature on the use of NLP to process or analyze symptom information doc...

Extraction of chemical-protein interactions from the literature using neural networks and narrow instance representation.

Database : the journal of biological databases and curation
The scientific literature contains large amounts of information on genes, proteins, chemicals and their interactions. Extraction and integration of this information in curated knowledge bases help researchers support their experimental results, leadi...

Learning predictive models of drug side-effect relationships from distributed representations of literature-derived semantic predications.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: The aim of this work is to leverage relational information extracted from biomedical literature using a novel synthesis of unsupervised pretraining, representational composition, and supervised machine learning for drug safety monitoring.

Identifying reports of randomized controlled trials (RCTs) via a hybrid machine learning and crowdsourcing approach.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVES: Identifying all published reports of randomized controlled trials (RCTs) is an important aim, but it requires extensive manual effort to separate RCTs from non-RCTs, even using current machine learning (ML) approaches. We aimed to make th...