AIMC Topic: Databases, Factual

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Empirical investigation of multi-source cross-validation in clinical ECG classification.

Computers in biology and medicine
Traditionally, machine learning-based clinical prediction models have been trained and evaluated on patient data from a single source, such as a hospital. Cross-validation methods can be used to estimate the accuracy of such models on new patients or...

BioTRY: A Comprehensive Knowledge Base for Titer, Rate, and Yield of Biosynthesis.

ACS synthetic biology
Synthetic biology is rapidly evolving into a data-intensive science that increasingly relies on massive data sets; one of its applications is the evaluation of the economic viability of fermentation processes. However, the key economic indicators, na...

Multi-scale dual-channel feature embedding decoder for biomedical image segmentation.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: Attaining global context along with local dependencies is of paramount importance for achieving highly accurate segmentation of objects from image frames and is challenging while developing deep learning-based biomedical ima...

Publicly Available Dental Image Datasets for Artificial Intelligence.

Journal of dental research
The development of artificial intelligence (AI) in dentistry requires large and well-annotated datasets. However, the availability of public dental imaging datasets remains unclear. This study aimed to provide a comprehensive overview of all publicly...

PLRTE: Progressive learning for biomedical relation triplet extraction using large language models.

Journal of biomedical informatics
Document-level relation triplet extraction is crucial in biomedical text mining, aiding in drug discovery and the construction of biomedical knowledge graphs. Current language models face challenges in generalizing to unseen datasets and relation typ...

USCT-UNet: Rethinking the Semantic Gap in U-Net Network From U-Shaped Skip Connections With Multichannel Fusion Transformer.

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society
Medical image segmentation is a crucial component of computer-aided clinical diagnosis, with state-of-the-art models often being variants of U-Net. Despite their success, these models' skip connections introduce an unnecessary semantic gap between th...

Integrating color histogram analysis and convolutional neural networks for skin lesion classification.

Computers in biology and medicine
The color of skin lesions is a crucial diagnostic feature for identifying malignant melanoma and other skin diseases. Typical colors associated with melanocytic lesions include tan, brown, black, red, white, and blue-gray. This study introduces a nov...

Less is More: Selective reduction of CT data for self-supervised pre-training of deep learning models with contrastive learning improves downstream classification performance.

Computers in biology and medicine
BACKGROUND: Self-supervised pre-training of deep learning models with contrastive learning is a widely used technique in image analysis. Current findings indicate a strong potential for contrastive pre-training on medical images. However, further res...

Development of HepatIA: A computed tomography annotation platform and database for artificial intelligence training in hepatocellular carcinoma detection at a Brazilian tertiary teaching hospital.

Clinics (Sao Paulo, Brazil)
BACKGROUND: Hepatocellular carcinoma (HCC) is a prevalent tumor with high mortality rates. Computed tomography (CT) is crucial in the non-invasive diagnosis of HCC. Recent advancements in artificial intelligence (AI) have shown significant potential ...

DeepCOVIDNet-CXR: deep learning strategies for identifying COVID-19 on enhanced chest X-rays.

Biomedizinische Technik. Biomedical engineering
OBJECTIVES: COVID-19 is one of the recent major epidemics, which accelerates its mortality and prevalence worldwide. Most literature on chest X-ray-based COVID-19 analysis has focused on multi-case classification (COVID-19, pneumonia, and normal) by ...