AIMC Topic: Ions

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Accurate structure prediction of biomolecular interactions with AlphaFold 3.

Nature
The introduction of AlphaFold 2 has spurred a revolution in modelling the structure of proteins and their interactions, enabling a huge range of applications in protein modelling and design. Here we describe our AlphaFold 3 model with a substantially...

An Artificial LiSiO Nociceptor with Neural Blockade and Self-Protection Abilities.

ACS applied materials & interfaces
An artificial nociceptor, as a critical and special bionic receptor, plays a key role in a bioelectronic device that detects stimuli and provides warnings. However, fully exploiting bioelectronic applications remains a major challenge due to the lack...

Efficient Spiking Neural Networks with Biologically Similar Lithium-Ion Memristor Neurons.

ACS applied materials & interfaces
Benefiting from the brain-inspired event-driven feature and asynchronous sparse coding approach, spiking neural networks (SNNs) are becoming a potentially energy-efficient replacement for conventional artificial neural networks. However, neuromorphic...

A Machine Learning-Driven Comparison of Ion Images Obtained by MALDI and MALDI-2 Mass Spectrometry Imaging.

Journal of the American Society for Mass Spectrometry
Matrix-assisted laser desorption ionization mass spectrometry imaging (MALDI-MSI) enables label-free imaging of biomolecules in biological tissues. However, many species remain undetected due to their poor ionization efficiencies. MALDI-2 (laser-indu...

DeepION: A Deep Learning-Based Low-Dimensional Representation Model of Ion Images for Mass Spectrometry Imaging.

Analytical chemistry
Mass spectrometry imaging (MSI) is a high-throughput imaging technique capable of the qualitative and quantitative in situ detection of thousands of ions in biological samples. Ion image representation is a technique that produces a low-dimensional v...

Geometric deep learning for the prediction of magnesium-binding sites in RNA structures.

International journal of biological macromolecules
Magnesium ions (Mg) are essential for the folding, functional expression, and structural stability of RNA molecules. However, predicting Mg-binding sites in RNA molecules based solely on RNA structures is still challenging. The molecular surface, cha...

Bound ion effects: Using machine learning method to study the kinesin Ncd's binding with microtubule.

Biophysical journal
Drosophila Ncd proteins are motor proteins that play important roles in spindle organization. Ncd and the tubulin dimer are highly charged. Thus, it is crucial to investigate Ncd-tubulin dimer interactions in the presence of ions, especially ions tha...

Injection-on-Skin Granular Adhesive for Interactive Human-Machine Interface.

Advanced materials (Deerfield Beach, Fla.)
Realization of interactive human-machine interfaces (iHMI) is improved with development of soft tissue-like strain sensors beyond hard robotic exosuits, potentially allowing cognitive behavior therapy and physical rehabilitation for patients with bra...

Transformer-based deep learning models for adsorption capacity prediction of heavy metal ions toward biochar-based adsorbents.

Journal of hazardous materials
Biochar adsorbents synthesized from food and agricultural wastes are commonly applied to eliminate heavy metal (HM) ions from wastewater. However, biochar's diverse characteristics and varied experimental conditions make the accurate estimation of th...

Rapid identification of Salmonella serovars Enteritidis and Typhimurium using whole cell matrix assisted laser desorption ionization - Time of flight mass spectrometry (MALDI-TOF MS) coupled with multivariate analysis and artificial intelligence.

Journal of microbiological methods
Salmonella is a common food-borne pathogen with Enteritidis and Typhimurium being among the most important serovars causing numerous outbreaks. A rapid method was investigated to identify these serovars using whole-cell MALDI-TOF MS coupled with mult...