AIMC Topic: Knowledge Bases

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Structured reviews for data and knowledge-driven research.

Database : the journal of biological databases and curation Jan 1, 2020
UNLABELLED: Hypothesis generation is a critical step in research and a cornerstone in the rare disease field. Research is most efficient when those hypotheses are based on the entirety of knowledge known to date. Systematic review articles are common...
Congenital Disorders of Glycosylation Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase Data Mining Data Curation Internet Knowledge Bases Biomedical Research Animals Computational Biology Systematic Reviews as Topic Humans Databases, Factual
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Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase.

Database : the journal of biological databases and curation Jan 1, 2020
Biological knowledgebases rely on expert biocuration of the research literature to maintain up-to-date collections of data organized in machine-readable form. To enter information into knowledgebases, curators need to follow three steps: (i) identify...
Internet Knowledge Bases User-Computer Interface Support Vector Machine Caenorhabditis elegans Data Mining Data Curation Databases, Factual Animals
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Developing a Prototype Knowledge-Based System for Diagnosis and Treatment of Diabetes Using Data Mining Techniques.

Ethiopian journal of health sciences Jan 1, 2020
BACKGROUND: Diabetes is a disease that affects the body's ability to produce or use insulin. A total of 425 million people are suffering from diabetes in the world. Of this, more than 16 million people live in the Africa Region, which is estimated to...
Humans Data Mining Data Accuracy Proof of Concept Study Decision Trees Knowledge Bases Africa Diabetes Mellitus
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Extracting medications and associated adverse drug events using a natural language processing system combining knowledge base and deep learning.

Journal of the American Medical Informatics Association : JAMIA Jan 1, 2020
OBJECTIVE: Detecting adverse drug events (ADEs) and medications related information in clinical notes is important for both hospital medical care and medical research. We describe our clinical natural language processing (NLP) system to automatically...
Humans Deep Learning Narration Neural Networks, Computer Knowledge Bases Electronic Health Records Information Storage and Retrieval Natural Language Processing Unified Medical Language System Drug-Related Side Effects and Adverse Reactions
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mirtronDB: a mirtron knowledge base.

Bioinformatics (Oxford, England) Oct 1, 2019
MOTIVATION: Mirtrons arise from short introns with atypical cleavage by using the splicing mechanism. In the current literature, there is no repository centralizing and organizing the data available to the public. To fill this gap, we developed mirtr...
Software MicroRNAs Introns Knowledge Bases RNA Splicing
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[From genome analysis to construction of an integrated omics knowledgebase for crops].

Yi chuan = Hereditas Sep 20, 2019
The advances in high-throughput technologies have enabled high-speed accumulation of omics data, which contain a large amount of genetic variations and their functional information. The integration and deep utilization of those data will be a long-te...
Genomics Crops, Agricultural Oryza Knowledge Bases
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Extending a Knowledge-Based System with Learning Capacity.

Studies in health technology and informatics Sep 3, 2019
Informal caregivers often complain about missing knowledge. A knowledge-based personalized educational system is developed, which provides caregiving relatives with the information needed. Yet, evaluation against domain experts indicated, that parts ...
Neural Networks, Computer Knowledge Bases
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Evaluation of the Fast Healthcare Interoperability Resources (FHIR) Standard for Representation of Knowledge Bases Encoded in the Arden Syntax.

Studies in health technology and informatics Aug 21, 2019
CONTEXT: Arden Syntax is a standard that encodes knowledge as Medical Logic Modules (MLMs) but lacks a standard query data model and terminology.
Health Information Systems Programming Languages Research Design Information Storage and Retrieval Knowledge Bases
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Evaluating the Validity of a Knowledge-Based System for Proactive Knowledge Transfer for Caregiving Relatives.

Studies in health technology and informatics Aug 21, 2019
The evaluation of the validity of a knowledge-based system is of great importance during its development. It determines whether the system represents the experts' knowledge correctly. This is highly important, but also particularly difficult, if the ...
Expert Testimony Learning Knowledge Bases Knowledge
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An Exploratory Study on Pseudo-Data Generation in Prescription and Adverse Drug Reaction Extraction.

Studies in health technology and informatics Aug 21, 2019
Prescription information and adverse drug reactions (ADR) are two components of detailed medication instructions that can benefit many aspects of clinical research. Automatic extraction of this information from free-text narratives via Information Ex...
Drug-Related Side Effects and Adverse Reactions Drug Prescriptions Information Storage and Retrieval Natural Language Processing Knowledge Bases Semantics
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